RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
COL4A6-201ENST00000334504 CLGNO14967 610 aa11.4□□□□□ -0.58
COL4A6-201ENST00000334504 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
COL4A6-201ENST00000334504 FKBP15Q5T1M5 1219 aa11.4□□□□□ -0.58
COL4A6-201ENST00000334504 WIZO95785 1651 aa11.4□□□□□ -0.58
COL4A6-201ENST00000334504 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.58
COL4A6-201ENST00000334504 CCDC94Q9BW85 323 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-201ENST00000334504 USO1O60763 962 aaKnown RBP11.4□□□□□ -0.59
COL4A6-201ENST00000334504 PRKAR2BP31323 418 aa11.4□□□□□ -0.59
COL4A6-201ENST00000334504 HSF2BPO75031 334 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 CEP131Q9UPN4 1083 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
COL4A6-201ENST00000334504 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 AACSQ86V21 672 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 YEATS4O95619 227 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 TDO2P48775 406 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
COL4A6-201ENST00000334504 NAA15Q9BXJ9 866 aaKnown RBP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 ATP2B2Q01814 1243 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 KRT32Q14532 448 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 ZSCAN23Q3MJ62 389 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CTNNBL1Q8WYA6 563 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 NEBLO76041 1014 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CETN2P41208 172 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 IGSF3O75054 1194 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 NOLC1Q14978 699 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CEP57Q86XR8 500 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 GDPD2Q9HCC8 539 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CTAGE5O15320 804 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A6-201ENST00000334504 WASF1Q92558 559 aa11.38□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC160A6NGH7 325 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC6Q16204 474 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 FBF1Q8TES7 1133 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 GNG11P61952 73 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 DAAM2Q86T65 1068 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC171Q6TFL3 1326 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 ALS2CR12Q96Q35 445 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 IL1RAPL2Q9NP60 686 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 STX1AQ16623 288 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 ANAPC15P60006 121 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
COL4A6-201ENST00000334504 GRM1Q13255 1194 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 SMAP1Q8IYB5 467 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 NUTM1Q86Y26 1132 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 DESP17661 470 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 TDRD12Q587J7 1177 aaKnown RBP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
COL4A6-201ENST00000334504 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
COL4A6-201ENST00000334504 CAPN2P17655 700 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 GUCY1B3Q02153 619 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 DDX19AQ9NUU7 478 aaKnown RBP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 MCM6Q14566 821 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 TSG101Q99816 390 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 BIN1O00499 593 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 BAG4O95429 457 aaKnown RBP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 TAOK3Q9H2K8 898 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 SCLT1Q96NL6 688 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-201ENST00000334504 CTNNA3Q9UI47 895 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 FSIP1Q8NA03 581 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 VPS36Q86VN1 386 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
COL4A6-201ENST00000334504 LRSAM1Q6UWE0 723 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 HOOK3Q86VS8 718 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 ZSCAN25Q6NSZ9 544 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms