RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
TREM1-202ENST00000334475 HDAC1Q13547 482 aaPredicted RBP11.37□□□□□ -0.59
TREM1-202ENST00000334475 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
TREM1-202ENST00000334475 NOB1Q9ULX3 412 aaKnown RBP11.37□□□□□ -0.59
TREM1-202ENST00000334475 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
TREM1-202ENST00000334475 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
TREM1-202ENST00000334475 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 NFAT5O94916 1531 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 LRP5O75197 1615 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 C8orf34Q49A92 452 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
TREM1-202ENST00000334475 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
TREM1-202ENST00000334475 TNNQ9UQP3 1299 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
TREM1-202ENST00000334475 SLIT3O75094 1523 aa11.35□□□□□ -0.59
TREM1-202ENST00000334475 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
TREM1-202ENST00000334475 AMPHP49418 695 aa11.35□□□□□ -0.59
TREM1-202ENST00000334475 NLRP6P59044 892 aa11.35□□□□□ -0.59
TREM1-202ENST00000334475 TWISTNBQ3B726 338 aaPredicted RBP11.35□□□□□ -0.59
TREM1-202ENST00000334475 FAM182BQ5T319 152 aa11.35□□□□□ -0.59
TREM1-202ENST00000334475 KRT28Q7Z3Y7 464 aa11.35□□□□□ -0.59
TREM1-202ENST00000334475 API5Q9BZZ5 524 aaKnown RBP11.35□□□□□ -0.59
TREM1-202ENST00000334475 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
TREM1-202ENST00000334475 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
TREM1-202ENST00000334475 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 RGS3P49796 1198 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 VPS72Q15906 364 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 ZBTB40Q9NUA8 1239 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 LAS1LQ9Y4W2 734 aaKnown RBP11.34□□□□□ -0.59
TREM1-202ENST00000334475 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 CRB1P82279 1406 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 ABCC4O15439 1325 aa11.34□□□□□ -0.59
TREM1-202ENST00000334475 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
TREM1-202ENST00000334475 N4BP2Q86UW6 1770 aaPredicted RBP11.33□□□□□ -0.59
TREM1-202ENST00000334475 CHL1O00533 1208 aa11.33□□□□□ -0.6
TREM1-202ENST00000334475 HOXC9P31274 260 aa11.33□□□□□ -0.6
TREM1-202ENST00000334475 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
TREM1-202ENST00000334475 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
TREM1-202ENST00000334475 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
TREM1-202ENST00000334475 KCNH5Q8NCM2 988 aa11.32□□□□□ -0.6
TREM1-202ENST00000334475 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
TREM1-202ENST00000334475 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
TREM1-202ENST00000334475 PDZRN3Q9UPQ7 1066 aa11.32□□□□□ -0.6
TREM1-202ENST00000334475 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
TREM1-202ENST00000334475 LMO7Q8WWI1 1683 aa11.31□□□□□ -0.6
TREM1-202ENST00000334475 RTF1Q92541 710 aaKnown RBP11.31□□□□□ -0.6
TREM1-202ENST00000334475 TNS3Q68CZ2 1445 aa11.31□□□□□ -0.6
TREM1-202ENST00000334475 PTPRCP08575 1304 aa11.31□□□□□ -0.6
TREM1-202ENST00000334475 NWD2Q9ULI1 1742 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
TREM1-202ENST00000334475 EN1Q05925 392 aaPredicted RBP11.3□□□□□ -0.6
TREM1-202ENST00000334475 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
TREM1-202ENST00000334475 SKAP1Q86WV1 359 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 EYA1Q99502 592 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
TREM1-202ENST00000334475 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
TREM1-202ENST00000334475 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
TREM1-202ENST00000334475 IP6K1Q92551 441 aa11.29□□□□□ -0.6
TREM1-202ENST00000334475 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
TREM1-202ENST00000334475 ABCC6O95255 1503 aa11.29□□□□□ -0.6
TREM1-202ENST00000334475 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
TREM1-202ENST00000334475 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
TREM1-202ENST00000334475 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
TREM1-202ENST00000334475 MTHFSDQ2M296 383 aaKnown RBP11.28□□□□□ -0.6
TREM1-202ENST00000334475 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
TREM1-202ENST00000334475 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
TREM1-202ENST00000334475 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.6
TREM1-202ENST00000334475 GNAT3A8MTJ3 354 aa11.27□□□□□ -0.61
TREM1-202ENST00000334475 SOX12O15370 315 aa11.27□□□□□ -0.61
TREM1-202ENST00000334475 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
TREM1-202ENST00000334475 PSME1Q06323 249 aa11.27□□□□□ -0.61
TREM1-202ENST00000334475 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
TREM1-202ENST00000334475 INTS3Q68E01 1043 aaKnown RBP11.27□□□□□ -0.61
TREM1-202ENST00000334475 PLEKHG2Q9H7P9 1386 aa11.27□□□□□ -0.61
TREM1-202ENST00000334475 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
TREM1-202ENST00000334475 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
TREM1-202ENST00000334475 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
TREM1-202ENST00000334475 MCM10Q7L590 875 aa11.26□□□□□ -0.61
TREM1-202ENST00000334475 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
TREM1-202ENST00000334475 USP19O94966 1318 aa11.26□□□□□ -0.61
TREM1-202ENST00000334475 THSD7AQ9UPZ6 1657 aa11.26□□□□□ -0.61
TREM1-202ENST00000334475 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
TREM1-202ENST00000334475 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
TREM1-202ENST00000334475 UPF2Q9HAU5 1272 aaKnown RBP11.25□□□□□ -0.61
TREM1-202ENST00000334475 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
TREM1-202ENST00000334475 TSPYL4Q9UJ04 414 aa11.25□□□□□ -0.61
TREM1-202ENST00000334475 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
TREM1-202ENST00000334475 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
TREM1-202ENST00000334475 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
TREM1-202ENST00000334475 NUCB1Q02818 461 aa11.24□□□□□ -0.61
TREM1-202ENST00000334475 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms