RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
CMTM1-203ENST00000333001 MSH5O43196 834 aa16.42■□□□□ 0.22
CMTM1-203ENST00000333001 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
CMTM1-203ENST00000333001 ARXQ96QS3 562 aa16.42■□□□□ 0.22
CMTM1-203ENST00000333001 KDM6AO15550 1401 aaPredicted RBP16.42■□□□□ 0.22
CMTM1-203ENST00000333001 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
CMTM1-203ENST00000333001 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
CMTM1-203ENST00000333001 ZNF784Q8NCA9 323 aaPredicted RBP16.41■□□□□ 0.22
CMTM1-203ENST00000333001 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
CMTM1-203ENST00000333001 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
CMTM1-203ENST00000333001 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
CMTM1-203ENST00000333001 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
CMTM1-203ENST00000333001 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
CMTM1-203ENST00000333001 SCN11AQ9UI33 1791 aa16.4■□□□□ 0.22
CMTM1-203ENST00000333001 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
CMTM1-203ENST00000333001 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
CMTM1-203ENST00000333001 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CMTM1-203ENST00000333001 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
CMTM1-203ENST00000333001 SSFA2P28290 1259 aa16.39■□□□□ 0.21
CMTM1-203ENST00000333001 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
CMTM1-203ENST00000333001 ZNF831Q5JPB2 1677 aa16.38■□□□□ 0.21
CMTM1-203ENST00000333001 FCHSD2O94868 740 aa16.38■□□□□ 0.21
CMTM1-203ENST00000333001 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
CMTM1-203ENST00000333001 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
CMTM1-203ENST00000333001 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
CMTM1-203ENST00000333001 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
CMTM1-203ENST00000333001 ITPK1Q13572 414 aa16.37■□□□□ 0.21
CMTM1-203ENST00000333001 GPR162Q16538 588 aa16.37■□□□□ 0.21
CMTM1-203ENST00000333001 LGR6Q9HBX8 967 aa16.37■□□□□ 0.21
CMTM1-203ENST00000333001 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
CMTM1-203ENST00000333001 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
CMTM1-203ENST00000333001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
CMTM1-203ENST00000333001 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
CMTM1-203ENST00000333001 RALBP1Q15311 655 aa16.36■□□□□ 0.21
CMTM1-203ENST00000333001 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
CMTM1-203ENST00000333001 GNPATO15228 680 aa16.35■□□□□ 0.21
CMTM1-203ENST00000333001 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
CMTM1-203ENST00000333001 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
CMTM1-203ENST00000333001 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
CMTM1-203ENST00000333001 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
CMTM1-203ENST00000333001 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
CMTM1-203ENST00000333001 PHF14O94880 888 aa16.34■□□□□ 0.21
CMTM1-203ENST00000333001 NEFMP07197 916 aa16.34■□□□□ 0.21
CMTM1-203ENST00000333001 ADRA2BP18089 450 aa16.34■□□□□ 0.21
CMTM1-203ENST00000333001 TRAPPC3LQ5T215 181 aa16.34■□□□□ 0.21
CMTM1-203ENST00000333001 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
CMTM1-203ENST00000333001 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
CMTM1-203ENST00000333001 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
CMTM1-203ENST00000333001 TEFQ10587 303 aa16.33■□□□□ 0.2
CMTM1-203ENST00000333001 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
CMTM1-203ENST00000333001 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
CMTM1-203ENST00000333001 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.2
CMTM1-203ENST00000333001 MRC1P22897 1456 aa16.33■□□□□ 0.2
CMTM1-203ENST00000333001 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
CMTM1-203ENST00000333001 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
CMTM1-203ENST00000333001 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
CMTM1-203ENST00000333001 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
CMTM1-203ENST00000333001 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
CMTM1-203ENST00000333001 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
CMTM1-203ENST00000333001 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
CMTM1-203ENST00000333001 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
CMTM1-203ENST00000333001 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
CMTM1-203ENST00000333001 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
CMTM1-203ENST00000333001 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
CMTM1-203ENST00000333001 COL5A3P25940 1745 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-203ENST00000333001 RFC4P35249 363 aa16.29■□□□□ 0.2
CMTM1-203ENST00000333001 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
CMTM1-203ENST00000333001 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
CMTM1-203ENST00000333001 CRKLP46109 303 aaKnown RBP16.28■□□□□ 0.2
CMTM1-203ENST00000333001 SLC39A6Q13433 755 aa16.28■□□□□ 0.2
CMTM1-203ENST00000333001 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-203ENST00000333001 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
CMTM1-203ENST00000333001 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.2
CMTM1-203ENST00000333001 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.2
CMTM1-203ENST00000333001 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
CMTM1-203ENST00000333001 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
CMTM1-203ENST00000333001 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.19
CMTM1-203ENST00000333001 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
CMTM1-203ENST00000333001 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
CMTM1-203ENST00000333001 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
CMTM1-203ENST00000333001 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
CMTM1-203ENST00000333001 STARD3NLO95772 234 aa16.25■□□□□ 0.19
CMTM1-203ENST00000333001 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
CMTM1-203ENST00000333001 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
CMTM1-203ENST00000333001 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
CMTM1-203ENST00000333001 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
CMTM1-203ENST00000333001 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
CMTM1-203ENST00000333001 TJP1Q07157 1748 aa16.23■□□□□ 0.19
CMTM1-203ENST00000333001 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
CMTM1-203ENST00000333001 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
CMTM1-203ENST00000333001 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
CMTM1-203ENST00000333001 ZPR1O75312 459 aa16.22■□□□□ 0.19
CMTM1-203ENST00000333001 GYS1P13807 737 aa16.22■□□□□ 0.19
CMTM1-203ENST00000333001 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
CMTM1-203ENST00000333001 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
CMTM1-203ENST00000333001 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
CMTM1-203ENST00000333001 UBR2Q8IWV8 1755 aa16.22■□□□□ 0.19
CMTM1-203ENST00000333001 MMP10P09238 476 aa16.21■□□□□ 0.19
CMTM1-203ENST00000333001 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms