RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
SUMO3-201ENST00000332859 KDM6AO15550 1401 aaPredicted RBP25.59■■□□□ 1.69
SUMO3-201ENST00000332859 BTBD11A6QL63 1104 aa25.59■■□□□ 1.69
SUMO3-201ENST00000332859 SIPA1L3O60292 1781 aaPredicted RBP25.59■■□□□ 1.69
SUMO3-201ENST00000332859 ZCRB1Q8TBF4 217 aaKnown RBP25.58■■□□□ 1.68
SUMO3-201ENST00000332859 PLCH1Q4KWH8 1693 aa25.57■■□□□ 1.68
SUMO3-201ENST00000332859 PCDH11XQ9BZA7 1347 aa25.57■■□□□ 1.68
SUMO3-201ENST00000332859 PCDH11YQ9BZA8 1340 aa25.57■■□□□ 1.68
SUMO3-201ENST00000332859 CYP27B1O15528 508 aa25.57■■□□□ 1.68
SUMO3-201ENST00000332859 DCAF5Q96JK2 942 aa25.57■■□□□ 1.68
SUMO3-201ENST00000332859 API5Q9BZZ5 524 aaKnown RBP25.56■■□□□ 1.68
SUMO3-201ENST00000332859 EIF4A1P60842 406 aaKnown RBP25.55■■□□□ 1.68
SUMO3-201ENST00000332859 MRC1P22897 1456 aa25.55■■□□□ 1.68
SUMO3-201ENST00000332859 ADAMTS2O95450 1211 aa25.54■■□□□ 1.68
SUMO3-201ENST00000332859 DDX19BQ9UMR2 479 aa25.54■■□□□ 1.68
SUMO3-201ENST00000332859 CCDC30Q5VVM6 783 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 SLC52A2Q9HAB3 445 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 MSH5O43196 834 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 HOXB7P09629 217 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 ITPRIPQ8IWB1 547 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 TMEM57Q8N5G2 664 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 STK31Q9BXU1 1019 aa25.53■■□□□ 1.68
SUMO3-201ENST00000332859 JCADQ9P266 1359 aa25.52■■□□□ 1.68
SUMO3-201ENST00000332859 NUTM2BA6NNL0 878 aaPredicted RBP25.52■■□□□ 1.68
SUMO3-201ENST00000332859 NUTM2EB1AL46 878 aaPredicted RBP25.52■■□□□ 1.68
SUMO3-201ENST00000332859 NUTM2AQ8IVF1 878 aaPredicted RBP25.52■■□□□ 1.68
SUMO3-201ENST00000332859 CHMP4AQ9BY43 222 aa25.52■■□□□ 1.68
SUMO3-201ENST00000332859 PDE4AP27815 886 aa25.51■■□□□ 1.67
SUMO3-201ENST00000332859 ANP32EQ9BTT0 268 aa25.51■■□□□ 1.67
SUMO3-201ENST00000332859 ABCC4O15439 1325 aa25.51■■□□□ 1.67
SUMO3-201ENST00000332859 PTPRCP08575 1304 aa25.51■■□□□ 1.67
SUMO3-201ENST00000332859 USP35Q9P2H5 1018 aa25.51■■□□□ 1.67
SUMO3-201ENST00000332859 NRAPQ86VF7 1730 aa25.5■■□□□ 1.67
SUMO3-201ENST00000332859 KCNQ3O43525 872 aa25.5■■□□□ 1.67
SUMO3-201ENST00000332859 SLC4A2P04920 1241 aa25.5■■□□□ 1.67
SUMO3-201ENST00000332859 BACH2Q9BYV9 841 aa25.5■■□□□ 1.67
SUMO3-201ENST00000332859 SHANK3Q9BYB0 1731 aa25.5■■□□□ 1.67
SUMO3-201ENST00000332859 ANP32AP39687 249 aaKnown RBP25.49■■□□□ 1.67
SUMO3-201ENST00000332859 DISP2A7MBM2 1401 aa25.48■■□□□ 1.67
SUMO3-201ENST00000332859 MYT1Q01538 1121 aa25.48■■□□□ 1.67
SUMO3-201ENST00000332859 HDGFL1Q5TGJ6 251 aa25.48■■□□□ 1.67
SUMO3-201ENST00000332859 NWD2Q9ULI1 1742 aa25.48■■□□□ 1.67
SUMO3-201ENST00000332859 NKX1-1Q15270 411 aaPredicted RBP25.47■■□□□ 1.67
SUMO3-201ENST00000332859 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
SUMO3-201ENST00000332859 NFATC2IPQ8NCF5 419 aa25.47■■□□□ 1.67
SUMO3-201ENST00000332859 RGS12O14924 1447 aa25.45■■□□□ 1.67
SUMO3-201ENST00000332859 HEG1Q9ULI3 1381 aa25.45■■□□□ 1.67
SUMO3-201ENST00000332859 CABP4P57796 275 aa25.45■■□□□ 1.66
SUMO3-201ENST00000332859 WNK3Q9BYP7 1800 aa25.45■■□□□ 1.66
SUMO3-201ENST00000332859 SLIT2O94813 1529 aa25.44■■□□□ 1.66
SUMO3-201ENST00000332859 CACNA1FO60840 1977 aa25.44■■□□□ 1.66
SUMO3-201ENST00000332859 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
SUMO3-201ENST00000332859 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
SUMO3-201ENST00000332859 ERVV-2B6SEH9 535 aa25.43■■□□□ 1.66
SUMO3-201ENST00000332859 NECTIN2Q92692 538 aa25.43■■□□□ 1.66
SUMO3-201ENST00000332859 GIGYF1O75420 1035 aaPredicted RBP25.42■■□□□ 1.66
SUMO3-201ENST00000332859 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
SUMO3-201ENST00000332859 SPATA31A6Q5VVP1 1343 aa25.41■■□□□ 1.66
SUMO3-201ENST00000332859 G2E3Q7L622 706 aa25.41■■□□□ 1.66
SUMO3-201ENST00000332859 CDCA7Q9BWT1 371 aaPredicted RBP25.41■■□□□ 1.66
SUMO3-201ENST00000332859 SPATA31A1Q5TZJ5 1347 aa25.41■■□□□ 1.66
SUMO3-201ENST00000332859 EIF2S2P20042 333 aaKnown RBP25.4■■□□□ 1.66
SUMO3-201ENST00000332859 FLIIQ13045 1269 aa25.4■■□□□ 1.66
SUMO3-201ENST00000332859 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
SUMO3-201ENST00000332859 TTC5Q8N0Z6 440 aa25.4■■□□□ 1.66
SUMO3-201ENST00000332859 ZBTB40Q9NUA8 1239 aa25.4■■□□□ 1.66
SUMO3-201ENST00000332859 PCDHB15Q9Y5E8 787 aa25.4■■□□□ 1.66
SUMO3-201ENST00000332859 INTS3Q68E01 1043 aaKnown RBP25.4■■□□□ 1.66
SUMO3-201ENST00000332859 IGHDP01880 384 aa25.39■■□□□ 1.65
SUMO3-201ENST00000332859 ERICH6Q7L0X2 663 aa25.39■■□□□ 1.65
SUMO3-201ENST00000332859 ZBTB7BO15156 539 aaPredicted RBP25.37■■□□□ 1.65
SUMO3-201ENST00000332859 IPO9Q96P70 1041 aaKnown RBP25.37■■□□□ 1.65
SUMO3-201ENST00000332859 SPATA31A5Q5VU36 1347 aa25.36■■□□□ 1.65
SUMO3-201ENST00000332859 SPATA31A7Q8IWB4 1347 aa25.36■■□□□ 1.65
SUMO3-201ENST00000332859 EXOC5O00471 708 aa25.36■■□□□ 1.65
SUMO3-201ENST00000332859 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
SUMO3-201ENST00000332859 SKAP1Q86WV1 359 aa25.36■■□□□ 1.65
SUMO3-201ENST00000332859 RWDD1Q9H446 243 aaPredicted RBP25.36■■□□□ 1.65
SUMO3-201ENST00000332859 TNS2Q63HR2 1409 aa25.36■■□□□ 1.65
SUMO3-201ENST00000332859 FMNL2Q96PY5 1086 aa25.35■■□□□ 1.65
SUMO3-201ENST00000332859 CHPF2Q9P2E5 772 aa25.35■■□□□ 1.65
SUMO3-201ENST00000332859 DBF4Q9UBU7 674 aaPredicted RBP25.35■■□□□ 1.65
SUMO3-201ENST00000332859 TOGARAM1Q9Y4F4 1720 aa25.34■■□□□ 1.65
SUMO3-201ENST00000332859 UNC5CLQ8IV45 518 aa25.34■■□□□ 1.65
SUMO3-201ENST00000332859 ZNF496Q96IT1 587 aaPredicted RBP25.34■■□□□ 1.65
SUMO3-201ENST00000332859 C8orf37Q96NL8 207 aa25.34■■□□□ 1.65
SUMO3-201ENST00000332859 PAPPAQ13219 1627 aa25.34■■□□□ 1.65
SUMO3-201ENST00000332859 C5P01031 1676 aa25.33■■□□□ 1.65
SUMO3-201ENST00000332859 CCT4P50991 539 aaKnown RBP25.33■■□□□ 1.65
SUMO3-201ENST00000332859 NGLY1Q96IV0 654 aa25.33■■□□□ 1.65
SUMO3-201ENST00000332859 FAM161AQ3B820 660 aa25.33■■□□□ 1.64
SUMO3-201ENST00000332859 LRP6O75581 1613 aa25.32■■□□□ 1.64
SUMO3-201ENST00000332859 PXDNLA1KZ92 1463 aa25.32■■□□□ 1.64
SUMO3-201ENST00000332859 SNRPA1P09661 255 aaKnown RBP25.32■■□□□ 1.64
SUMO3-201ENST00000332859 NOP58Q9Y2X3 529 aaKnown RBP25.32■■□□□ 1.64
SUMO3-201ENST00000332859 CCDC9Q9Y3X0 531 aaKnown RBP25.32■■□□□ 1.64
SUMO3-201ENST00000332859 PRAMEF22A3QJZ6 481 aa25.31■■□□□ 1.64
SUMO3-201ENST00000332859 HSPA1LP34931 641 aa25.31■■□□□ 1.64
SUMO3-201ENST00000332859 BARGINQ6ZT62 677 aa25.31■■□□□ 1.64
SUMO3-201ENST00000332859 F6X3S4 739 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms