RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SLC4A10Q6U841 1118 aa18.91■□□□□ 0.62
BRCC3-201ENST00000330045 G2E3Q7L622 706 aa18.91■□□□□ 0.62
BRCC3-201ENST00000330045 KDRP35968 1356 aa18.91■□□□□ 0.62
BRCC3-201ENST00000330045 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
BRCC3-201ENST00000330045 BAG4O95429 457 aaKnown RBP18.9■□□□□ 0.62
BRCC3-201ENST00000330045 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
BRCC3-201ENST00000330045 F6X3S4 739 aa18.9■□□□□ 0.62
BRCC3-201ENST00000330045 REC8O95072 547 aa18.9■□□□□ 0.62
BRCC3-201ENST00000330045 FLT4P35916 1363 aa18.89■□□□□ 0.61
BRCC3-201ENST00000330045 NUCB2P80303 420 aa18.89■□□□□ 0.61
BRCC3-201ENST00000330045 MARF1Q9Y4F3 1742 aaKnown RBP18.89■□□□□ 0.61
BRCC3-201ENST00000330045 STRCP1A6NGW2 1772 aa18.89■□□□□ 0.61
BRCC3-201ENST00000330045 NWD1Q149M9 1564 aa18.88■□□□□ 0.61
BRCC3-201ENST00000330045 ST18O60284 1047 aa18.88■□□□□ 0.61
BRCC3-201ENST00000330045 OSBPL3Q9H4L5 887 aa18.88■□□□□ 0.61
BRCC3-201ENST00000330045 CLCN1P35523 988 aa18.88■□□□□ 0.61
BRCC3-201ENST00000330045 ERC2O15083 957 aa18.87■□□□□ 0.61
BRCC3-201ENST00000330045 GNAI2P04899 355 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 PDE1AP54750 535 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 PSME1Q06323 249 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
BRCC3-201ENST00000330045 EYA1Q99502 592 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 CWC22Q9HCG8 908 aaKnown RBP18.86■□□□□ 0.61
BRCC3-201ENST00000330045 DDX49Q9Y6V7 483 aaKnown RBP18.86■□□□□ 0.61
BRCC3-201ENST00000330045 LRRC37A3O60309 1634 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 AMPHP49418 695 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 STK31Q9BXU1 1019 aa18.86■□□□□ 0.61
BRCC3-201ENST00000330045 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
BRCC3-201ENST00000330045 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
BRCC3-201ENST00000330045 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
BRCC3-201ENST00000330045 MCTP1Q6DN14 999 aa18.83■□□□□ 0.61
BRCC3-201ENST00000330045 LTV1Q96GA3 475 aaPredicted RBP18.83■□□□□ 0.61
BRCC3-201ENST00000330045 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.61
BRCC3-201ENST00000330045 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
BRCC3-201ENST00000330045 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.6
BRCC3-201ENST00000330045 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.6
BRCC3-201ENST00000330045 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
BRCC3-201ENST00000330045 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
BRCC3-201ENST00000330045 FLIIQ13045 1269 aa18.82■□□□□ 0.6
BRCC3-201ENST00000330045 PKP1Q13835 747 aa18.82■□□□□ 0.6
BRCC3-201ENST00000330045 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
BRCC3-201ENST00000330045 LMTK3Q96Q04 1460 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 GNAI3P08754 354 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
BRCC3-201ENST00000330045 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 ESPNB1AK53 854 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 HOXC9P31274 260 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 ZGPATQ8N5A5 531 aaKnown RBP18.81■□□□□ 0.6
BRCC3-201ENST00000330045 LRRCC1Q9C099 1032 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 C19orf44Q9H6X5 657 aa18.81■□□□□ 0.6
BRCC3-201ENST00000330045 TUBGCP6Q96RT7 1819 aa18.8■□□□□ 0.6
BRCC3-201ENST00000330045 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
BRCC3-201ENST00000330045 SALL3Q9BXA9 1300 aa18.8■□□□□ 0.6
BRCC3-201ENST00000330045 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
BRCC3-201ENST00000330045 LMBRD1Q9NUN5 540 aa18.79■□□□□ 0.6
BRCC3-201ENST00000330045 N4BP2Q86UW6 1770 aaPredicted RBP18.79■□□□□ 0.6
BRCC3-201ENST00000330045 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
BRCC3-201ENST00000330045 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
BRCC3-201ENST00000330045 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
BRCC3-201ENST00000330045 PNMA6EA0A0J9YXQ4 647 aa18.78■□□□□ 0.6
BRCC3-201ENST00000330045 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
BRCC3-201ENST00000330045 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
BRCC3-201ENST00000330045 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
BRCC3-201ENST00000330045 MX1P20591 662 aa18.78■□□□□ 0.6
BRCC3-201ENST00000330045 NCLP19338 710 aaKnown RBP18.77■□□□□ 0.6
BRCC3-201ENST00000330045 NASPP49321 788 aaPredicted RBP18.77■□□□□ 0.6
BRCC3-201ENST00000330045 ESYT1Q9BSJ8 1104 aa18.77■□□□□ 0.6
BRCC3-201ENST00000330045 NEK4P51957 841 aa18.77■□□□□ 0.59
BRCC3-201ENST00000330045 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 ZNF445P59923 1031 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
BRCC3-201ENST00000330045 STRCQ7RTU9 1775 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 CCDC173Q0VFZ6 552 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 CAVIN1Q6NZI2 390 aaKnown RBP18.76■□□□□ 0.59
BRCC3-201ENST00000330045 KRT28Q7Z3Y7 464 aa18.76■□□□□ 0.59
BRCC3-201ENST00000330045 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 ATF3P18847 181 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 MCCP23508 829 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 MCM2P49736 904 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
BRCC3-201ENST00000330045 LRRFIP2Q9Y608 721 aaKnown RBP18.75■□□□□ 0.59
BRCC3-201ENST00000330045 MST1RQ04912 1400 aa18.75■□□□□ 0.59
BRCC3-201ENST00000330045 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
BRCC3-201ENST00000330045 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
BRCC3-201ENST00000330045 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
BRCC3-201ENST00000330045 PPP1R9BQ96SB3 815 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 SRCIN1Q9C0H9 1055 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 BABAM1Q9NWV8 329 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 NFAT5O94916 1531 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 PRPF40AO75400 957 aaKnown RBP18.74■□□□□ 0.59
BRCC3-201ENST00000330045 CHMLP26374 656 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 ZSCAN23Q3MJ62 389 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 TMX3Q96JJ7 454 aa18.74■□□□□ 0.59
BRCC3-201ENST00000330045 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms