RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 ITPK1Q13572 414 aa13.09□□□□□ -0.31
GDF3-201ENST00000329913 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
GDF3-201ENST00000329913 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
GDF3-201ENST00000329913 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
GDF3-201ENST00000329913 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
GDF3-201ENST00000329913 GNPATO15228 680 aa13.07□□□□□ -0.32
GDF3-201ENST00000329913 EYA1Q99502 592 aa13.07□□□□□ -0.32
GDF3-201ENST00000329913 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
GDF3-201ENST00000329913 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
GDF3-201ENST00000329913 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
GDF3-201ENST00000329913 SIK1P57059 783 aa13.06□□□□□ -0.32
GDF3-201ENST00000329913 ADCY9O60503 1353 aa13.06□□□□□ -0.32
GDF3-201ENST00000329913 MAP2P11137 1827 aaKnown RBP13.05□□□□□ -0.32
GDF3-201ENST00000329913 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
GDF3-201ENST00000329913 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
GDF3-201ENST00000329913 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
GDF3-201ENST00000329913 SPG7Q9UQ90 795 aa13.04□□□□□ -0.32
GDF3-201ENST00000329913 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 MMP10P09238 476 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 PHKG2P15735 406 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 EIF4A2Q14240 407 aaKnown RBP13.03□□□□□ -0.32
GDF3-201ENST00000329913 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
GDF3-201ENST00000329913 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
GDF3-201ENST00000329913 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
GDF3-201ENST00000329913 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.32
GDF3-201ENST00000329913 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
GDF3-201ENST00000329913 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.33
GDF3-201ENST00000329913 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
GDF3-201ENST00000329913 SSFA2P28290 1259 aa13.01□□□□□ -0.33
GDF3-201ENST00000329913 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
GDF3-201ENST00000329913 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
GDF3-201ENST00000329913 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
GDF3-201ENST00000329913 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
GDF3-201ENST00000329913 KIF24Q5T7B8 1368 aa13□□□□□ -0.33
GDF3-201ENST00000329913 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
GDF3-201ENST00000329913 BCS1LQ9Y276 419 aa13□□□□□ -0.33
GDF3-201ENST00000329913 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
GDF3-201ENST00000329913 KDRP35968 1356 aa12.99□□□□□ -0.33
GDF3-201ENST00000329913 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
GDF3-201ENST00000329913 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
GDF3-201ENST00000329913 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
GDF3-201ENST00000329913 KIF3CO14782 793 aa12.98□□□□□ -0.33
GDF3-201ENST00000329913 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
GDF3-201ENST00000329913 HSPA6P17066 643 aa12.98□□□□□ -0.33
GDF3-201ENST00000329913 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
GDF3-201ENST00000329913 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
GDF3-201ENST00000329913 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
GDF3-201ENST00000329913 DPEP1P16444 411 aa12.97□□□□□ -0.33
GDF3-201ENST00000329913 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
GDF3-201ENST00000329913 HTRA3P83110 453 aa12.96□□□□□ -0.33
GDF3-201ENST00000329913 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
GDF3-201ENST00000329913 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
GDF3-201ENST00000329913 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.33
GDF3-201ENST00000329913 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.33
GDF3-201ENST00000329913 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
GDF3-201ENST00000329913 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
GDF3-201ENST00000329913 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.34
GDF3-201ENST00000329913 GYS1P13807 737 aa12.95□□□□□ -0.34
GDF3-201ENST00000329913 C4AP0C0L4 1744 aa12.94□□□□□ -0.34
GDF3-201ENST00000329913 COL5A3P25940 1745 aaPredicted RBP12.94□□□□□ -0.34
GDF3-201ENST00000329913 FCHSD2O94868 740 aa12.94□□□□□ -0.34
GDF3-201ENST00000329913 RFC4P35249 363 aa12.93□□□□□ -0.34
GDF3-201ENST00000329913 CABP4P57796 275 aa12.93□□□□□ -0.34
GDF3-201ENST00000329913 PANK3Q9H999 370 aa12.93□□□□□ -0.34
GDF3-201ENST00000329913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
GDF3-201ENST00000329913 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
GDF3-201ENST00000329913 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
GDF3-201ENST00000329913 CHRNA5P30532 468 aa12.92□□□□□ -0.34
GDF3-201ENST00000329913 DDR1Q08345 913 aa12.92□□□□□ -0.34
GDF3-201ENST00000329913 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
GDF3-201ENST00000329913 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
GDF3-201ENST00000329913 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
GDF3-201ENST00000329913 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
GDF3-201ENST00000329913 C9orf131Q5VYM1 1079 aa12.91□□□□□ -0.34
GDF3-201ENST00000329913 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
GDF3-201ENST00000329913 TJP1Q07157 1748 aa12.91□□□□□ -0.34
GDF3-201ENST00000329913 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 RPS6KA4O75676 772 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 KCNA3P22001 575 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 MTHFSP49914 203 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
GDF3-201ENST00000329913 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
GDF3-201ENST00000329913 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 PCNTO95613 3336 aa12.9□□□□□ -0.34
GDF3-201ENST00000329913 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
GDF3-201ENST00000329913 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
GDF3-201ENST00000329913 TGFB2P61812 414 aa12.88□□□□□ -0.35
GDF3-201ENST00000329913 RASSF7Q02833 373 aa12.88□□□□□ -0.35
GDF3-201ENST00000329913 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
GDF3-201ENST00000329913 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
GDF3-201ENST00000329913 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
GDF3-201ENST00000329913 DNAJC10Q8IXB1 793 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms