RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PTPRCP08575 1304 aa25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 PHKG2P15735 406 aa25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 CCDC30Q5VVM6 783 aa25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 G2E3Q7L622 706 aa25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 ZBTB47Q9UFB7 747 aaPredicted RBP25.67■■□□□ 1.7
RIPPLY3-201ENST00000329553 RGS12O14924 1447 aa25.66■■□□□ 1.7
RIPPLY3-201ENST00000329553 NECTIN2Q92692 538 aa25.66■■□□□ 1.7
RIPPLY3-201ENST00000329553 KDM3BQ7LBC6 1761 aa25.66■■□□□ 1.7
RIPPLY3-201ENST00000329553 STK31Q9BXU1 1019 aa25.65■■□□□ 1.7
RIPPLY3-201ENST00000329553 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.7
RIPPLY3-201ENST00000329553 IFNL2Q8IZJ0 200 aa25.64■■□□□ 1.7
RIPPLY3-201ENST00000329553 AHDC1Q5TGY3 1603 aaPredicted RBP25.64■■□□□ 1.7
RIPPLY3-201ENST00000329553 PLEKHG2Q9H7P9 1386 aa25.64■■□□□ 1.69
RIPPLY3-201ENST00000329553 INTS3Q68E01 1043 aaKnown RBP25.63■■□□□ 1.69
RIPPLY3-201ENST00000329553 CYP27B1O15528 508 aa25.63■■□□□ 1.69
RIPPLY3-201ENST00000329553 CHMP4BQ9H444 224 aaKnown RBP25.63■■□□□ 1.69
RIPPLY3-201ENST00000329553 STRN4Q9NRL3 753 aa25.63■■□□□ 1.69
RIPPLY3-201ENST00000329553 EVA1CP58658 441 aa25.62■■□□□ 1.69
RIPPLY3-201ENST00000329553 KDM6AO15550 1401 aaPredicted RBP25.62■■□□□ 1.69
RIPPLY3-201ENST00000329553 HDAC1Q13547 482 aaPredicted RBP25.61■■□□□ 1.69
RIPPLY3-201ENST00000329553 LARP1Q6PKG0 1096 aaKnown RBP25.61■■□□□ 1.69
RIPPLY3-201ENST00000329553 CARD10Q9BWT7 1032 aa25.61■■□□□ 1.69
RIPPLY3-201ENST00000329553 HDGFL1Q5TGJ6 251 aa25.6■■□□□ 1.69
RIPPLY3-201ENST00000329553 SIPA1L3O60292 1781 aaPredicted RBP25.6■■□□□ 1.69
RIPPLY3-201ENST00000329553 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
RIPPLY3-201ENST00000329553 RGS3P49796 1198 aa25.6■■□□□ 1.69
RIPPLY3-201ENST00000329553 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
RIPPLY3-201ENST00000329553 HOXB7P09629 217 aa25.59■■□□□ 1.69
RIPPLY3-201ENST00000329553 SLC52A2Q9HAB3 445 aa25.59■■□□□ 1.69
RIPPLY3-201ENST00000329553 EIF2S2P20042 333 aaKnown RBP25.58■■□□□ 1.69
RIPPLY3-201ENST00000329553 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
RIPPLY3-201ENST00000329553 FLIIQ13045 1269 aa25.57■■□□□ 1.68
RIPPLY3-201ENST00000329553 C1orf115Q9H7X2 142 aa25.57■■□□□ 1.68
RIPPLY3-201ENST00000329553 F6X3S4 739 aa25.57■■□□□ 1.68
RIPPLY3-201ENST00000329553 DCAF5Q96JK2 942 aa25.57■■□□□ 1.68
RIPPLY3-201ENST00000329553 NFATC2IPQ8NCF5 419 aa25.56■■□□□ 1.68
RIPPLY3-201ENST00000329553 ZCRB1Q8TBF4 217 aaKnown RBP25.56■■□□□ 1.68
RIPPLY3-201ENST00000329553 BTG4Q9NY30 223 aa25.56■■□□□ 1.68
RIPPLY3-201ENST00000329553 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
RIPPLY3-201ENST00000329553 HEG1Q9ULI3 1381 aa25.55■■□□□ 1.68
RIPPLY3-201ENST00000329553 IL2RBP14784 551 aa25.55■■□□□ 1.68
RIPPLY3-201ENST00000329553 GIGYF1O75420 1035 aaPredicted RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 HSP90AB1P08238 724 aaKnown RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 FKBP5Q13451 457 aaPredicted RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 NPM2Q86SE8 214 aaKnown RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 COL22A1Q8NFW1 1626 aaPredicted RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 PARP4Q9UKK3 1724 aaKnown RBP25.54■■□□□ 1.68
RIPPLY3-201ENST00000329553 SLC4A10Q6U841 1118 aa25.53■■□□□ 1.68
RIPPLY3-201ENST00000329553 SLC39A6Q13433 755 aa25.53■■□□□ 1.68
RIPPLY3-201ENST00000329553 TOM1O60784 492 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 NBR1Q14596 966 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 PHAXQ9H814 394 aaKnown RBP25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 PIP4K2BP78356 416 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 ZNF790Q6PG37 636 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 CHMP4AQ9BY43 222 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 BCL11AQ9H165 835 aa25.52■■□□□ 1.68
RIPPLY3-201ENST00000329553 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
RIPPLY3-201ENST00000329553 CHPF2Q9P2E5 772 aa25.51■■□□□ 1.67
RIPPLY3-201ENST00000329553 PRAMEF22A3QJZ6 481 aa25.51■■□□□ 1.67
RIPPLY3-201ENST00000329553 USP35Q9P2H5 1018 aa25.51■■□□□ 1.67
RIPPLY3-201ENST00000329553 PCDH11XQ9BZA7 1347 aa25.5■■□□□ 1.67
RIPPLY3-201ENST00000329553 PCDH11YQ9BZA8 1340 aa25.5■■□□□ 1.67
RIPPLY3-201ENST00000329553 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
RIPPLY3-201ENST00000329553 SIRT2Q8IXJ6 389 aa25.5■■□□□ 1.67
RIPPLY3-201ENST00000329553 CCT4P50991 539 aaKnown RBP25.49■■□□□ 1.67
RIPPLY3-201ENST00000329553 COL14A1Q05707 1796 aaKnown RBP25.49■■□□□ 1.67
RIPPLY3-201ENST00000329553 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
RIPPLY3-201ENST00000329553 MEIS3Q99687 375 aa25.48■■□□□ 1.67
RIPPLY3-201ENST00000329553 MRC1P22897 1456 aa25.48■■□□□ 1.67
RIPPLY3-201ENST00000329553 CABP4P57796 275 aa25.47■■□□□ 1.67
RIPPLY3-201ENST00000329553 ANXA1P04083 346 aa25.47■■□□□ 1.67
RIPPLY3-201ENST00000329553 DEKP35659 375 aaKnown RBP25.47■■□□□ 1.67
RIPPLY3-201ENST00000329553 DDX54Q8TDD1 881 aaKnown RBP25.46■■□□□ 1.67
RIPPLY3-201ENST00000329553 DBF4Q9UBU7 674 aaPredicted RBP25.45■■□□□ 1.67
RIPPLY3-201ENST00000329553 NKX1-1Q15270 411 aaPredicted RBP25.45■■□□□ 1.66
RIPPLY3-201ENST00000329553 ZNF496Q96IT1 587 aaPredicted RBP25.44■■□□□ 1.66
RIPPLY3-201ENST00000329553 ADAMTS2O95450 1211 aa25.43■■□□□ 1.66
RIPPLY3-201ENST00000329553 SHANK3Q9BYB0 1731 aa25.43■■□□□ 1.66
RIPPLY3-201ENST00000329553 PROSER3Q2NL68 480 aa25.42■■□□□ 1.66
RIPPLY3-201ENST00000329553 UBAP1LF5GYI3 381 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 FAM161AQ3B820 660 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 TTC5Q8N0Z6 440 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 ANKRD44Q8N8A2 993 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 GCC1Q96CN9 775 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 ATP10DQ9P241 1426 aa25.41■■□□□ 1.66
RIPPLY3-201ENST00000329553 ERVV-2B6SEH9 535 aa25.4■■□□□ 1.66
RIPPLY3-201ENST00000329553 NUCB1Q02818 461 aa25.4■■□□□ 1.66
RIPPLY3-201ENST00000329553 C8orf34Q49A92 452 aa25.4■■□□□ 1.66
RIPPLY3-201ENST00000329553 RPAP2Q8IXW5 612 aaPredicted RBP25.4■■□□□ 1.66
RIPPLY3-201ENST00000329553 CEP85Q6P2H3 762 aa25.4■■□□□ 1.66
RIPPLY3-201ENST00000329553 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.65
RIPPLY3-201ENST00000329553 PI4KAP2A4QPH2 592 aa25.39■■□□□ 1.65
RIPPLY3-201ENST00000329553 PI4KAP1Q8N8J0 262 aa25.39■■□□□ 1.65
RIPPLY3-201ENST00000329553 NUTM2BA6NNL0 878 aaPredicted RBP25.38■■□□□ 1.65
RIPPLY3-201ENST00000329553 NUTM2EB1AL46 878 aaPredicted RBP25.38■■□□□ 1.65
RIPPLY3-201ENST00000329553 NUTM2AQ8IVF1 878 aaPredicted RBP25.38■■□□□ 1.65
RIPPLY3-201ENST00000329553 DDRGK1Q96HY6 314 aa25.38■■□□□ 1.65
RIPPLY3-201ENST00000329553 PDIA6Q15084 440 aa25.37■■□□□ 1.65
RIPPLY3-201ENST00000329553 FMNL2Q96PY5 1086 aa25.37■■□□□ 1.65
RIPPLY3-201ENST00000329553 DDX21Q9NR30 783 aaKnown RBP eCLIP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms