RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 ATP6V1AP38606 617 aa28.06■■■□□ 2.08
TNFRSF18-201ENST00000328596 C4BP0C0L5 1744 aa28.05■■■□□ 2.08
TNFRSF18-201ENST00000328596 RNMTO43148 476 aaKnown RBP28.04■■■□□ 2.08
TNFRSF18-201ENST00000328596 LINC00116Q8NCU8 138 aa28.04■■■□□ 2.08
TNFRSF18-201ENST00000328596 AK7Q96M32 723 aa28.04■■■□□ 2.08
TNFRSF18-201ENST00000328596 SGIP1Q9BQI5 828 aa28.04■■■□□ 2.08
TNFRSF18-201ENST00000328596 LGR6Q9HBX8 967 aa28.04■■■□□ 2.08
TNFRSF18-201ENST00000328596 U2AF1L5P0DN76 240 aaPredicted RBP28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 U2AF1Q01081 240 aaKnown RBP eCLIP28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 ITPK1Q13572 414 aa28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 COL23A1Q86Y22 540 aaPredicted RBP28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 GAS2L2Q8NHY3 880 aa28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 RBM42Q9BTD8 480 aaKnown RBP28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 RSPH6AQ9H0K4 717 aa28.03■■■□□ 2.08
TNFRSF18-201ENST00000328596 PRKAR2BP31323 418 aa28.02■■■□□ 2.08
TNFRSF18-201ENST00000328596 FLAD1Q8NFF5 587 aa28.02■■■□□ 2.08
TNFRSF18-201ENST00000328596 SLC52A2Q9HAB3 445 aa28.02■■■□□ 2.08
TNFRSF18-201ENST00000328596 MSH5O43196 834 aa28.01■■■□□ 2.07
TNFRSF18-201ENST00000328596 RALBP1Q15311 655 aa28■■■□□ 2.07
TNFRSF18-201ENST00000328596 SLC4A9Q96Q91 983 aa28■■■□□ 2.07
TNFRSF18-201ENST00000328596 FCHSD2O94868 740 aa27.99■■■□□ 2.07
TNFRSF18-201ENST00000328596 MRC1P22897 1456 aa27.99■■■□□ 2.07
TNFRSF18-201ENST00000328596 ZNF831Q5JPB2 1677 aa27.99■■■□□ 2.07
TNFRSF18-201ENST00000328596 ADAMTS7Q9UKP4 1686 aa27.99■■■□□ 2.07
TNFRSF18-201ENST00000328596 PHACTR3Q96KR7 559 aa27.98■■■□□ 2.07
TNFRSF18-201ENST00000328596 MAP3K5Q99683 1374 aa27.98■■■□□ 2.07
TNFRSF18-201ENST00000328596 VIRMAQ69YN4 1812 aaKnown RBP27.97■■■□□ 2.07
TNFRSF18-201ENST00000328596 GNAT3A8MTJ3 354 aa27.97■■■□□ 2.07
TNFRSF18-201ENST00000328596 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
TNFRSF18-201ENST00000328596 AMIGO3Q86WK7 504 aa27.96■■■□□ 2.07
TNFRSF18-201ENST00000328596 ARXQ96QS3 562 aa27.96■■■□□ 2.07
TNFRSF18-201ENST00000328596 UBR3Q6ZT12 1888 aa27.95■■■□□ 2.07
TNFRSF18-201ENST00000328596 COL24A1Q17RW2 1714 aa27.95■■■□□ 2.07
TNFRSF18-201ENST00000328596 POLD1P28340 1107 aa27.95■■■□□ 2.06
TNFRSF18-201ENST00000328596 GNPATO15228 680 aa27.94■■■□□ 2.06
TNFRSF18-201ENST00000328596 SSFA2P28290 1259 aa27.94■■■□□ 2.06
TNFRSF18-201ENST00000328596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.93■■■□□ 2.06
TNFRSF18-201ENST00000328596 PHF14O94880 888 aa27.93■■■□□ 2.06
TNFRSF18-201ENST00000328596 IL17REQ8NFR9 667 aa27.92■■■□□ 2.06
TNFRSF18-201ENST00000328596 FHDC1Q9C0D6 1143 aaPredicted RBP27.92■■■□□ 2.06
TNFRSF18-201ENST00000328596 RC3H1Q5TC82 1133 aaKnown RBP27.91■■■□□ 2.06
TNFRSF18-201ENST00000328596 SMIM5Q71RC9 77 aa27.91■■■□□ 2.06
TNFRSF18-201ENST00000328596 CNTNAP4Q9C0A0 1308 aa27.91■■■□□ 2.06
TNFRSF18-201ENST00000328596 COL5A3P25940 1745 aaPredicted RBP27.9■■■□□ 2.06
TNFRSF18-201ENST00000328596 SLC39A6Q13433 755 aa27.9■■■□□ 2.06
TNFRSF18-201ENST00000328596 TEFQ10587 303 aa27.89■■■□□ 2.06
TNFRSF18-201ENST00000328596 SYT17Q9BSW7 474 aa27.89■■■□□ 2.06
TNFRSF18-201ENST00000328596 ZNF316A6NFI3 1004 aaPredicted RBP27.88■■■□□ 2.05
TNFRSF18-201ENST00000328596 MSL1Q68DK7 614 aa27.88■■■□□ 2.05
TNFRSF18-201ENST00000328596 RTCBQ9Y3I0 505 aaKnown RBP27.88■■■□□ 2.05
TNFRSF18-201ENST00000328596 MYBBP1AQ9BQG0 1328 aaKnown RBP27.88■■■□□ 2.05
TNFRSF18-201ENST00000328596 CEMIPQ8WUJ3 1361 aa27.86■■■□□ 2.05
TNFRSF18-201ENST00000328596 CICQ96RK0 1608 aaPredicted RBP27.86■■■□□ 2.05
TNFRSF18-201ENST00000328596 TJP1Q07157 1748 aa27.85■■■□□ 2.05
TNFRSF18-201ENST00000328596 KCPQ6ZWJ8 1503 aa27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 RPS6KA4O75676 772 aa27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 NEFMP07197 916 aa27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 CRKLP46109 303 aaKnown RBP27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 TRAPPC3LQ5T215 181 aa27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 RTF1Q92541 710 aaKnown RBP27.84■■■□□ 2.05
TNFRSF18-201ENST00000328596 MYH14Q7Z406 1995 aaKnown RBP27.83■■■□□ 2.05
TNFRSF18-201ENST00000328596 ADRA2BP18089 450 aa27.83■■■□□ 2.05
TNFRSF18-201ENST00000328596 TTC5Q8N0Z6 440 aa27.83■■■□□ 2.05
TNFRSF18-201ENST00000328596 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
TNFRSF18-201ENST00000328596 VSIG10Q8N0Z9 540 aa27.82■■■□□ 2.04
TNFRSF18-201ENST00000328596 PLEKHF1Q96S99 279 aa27.82■■■□□ 2.04
TNFRSF18-201ENST00000328596 PNNQ9H307 717 aaKnown RBP27.82■■■□□ 2.04
TNFRSF18-201ENST00000328596 SIPA1L3O60292 1781 aaPredicted RBP27.81■■■□□ 2.04
TNFRSF18-201ENST00000328596 DCAF8L1A6NGE4 600 aa27.81■■■□□ 2.04
TNFRSF18-201ENST00000328596 HTATSF1O43719 755 aaKnown RBP27.81■■■□□ 2.04
TNFRSF18-201ENST00000328596 ZNF790Q6PG37 636 aa27.8■■■□□ 2.04
TNFRSF18-201ENST00000328596 KLHL34Q8N239 644 aa27.8■■■□□ 2.04
TNFRSF18-201ENST00000328596 ARHGEF1Q92888 912 aaKnown RBP27.8■■■□□ 2.04
TNFRSF18-201ENST00000328596 UBR2Q8IWV8 1755 aa27.8■■■□□ 2.04
TNFRSF18-201ENST00000328596 MCM10Q7L590 875 aa27.79■■■□□ 2.04
TNFRSF18-201ENST00000328596 PRKRIP1Q9H875 184 aaPredicted RBP27.79■■■□□ 2.04
TNFRSF18-201ENST00000328596 INTS5Q6P9B9 1019 aaKnown RBP27.78■■■□□ 2.04
TNFRSF18-201ENST00000328596 BTBD11A6QL63 1104 aa27.77■■■□□ 2.04
TNFRSF18-201ENST00000328596 CYP19A1P11511 503 aaPredicted RBP27.77■■■□□ 2.04
TNFRSF18-201ENST00000328596 RFC4P35249 363 aa27.77■■■□□ 2.04
TNFRSF18-201ENST00000328596 CCDC87Q9NVE4 849 aa27.77■■■□□ 2.04
TNFRSF18-201ENST00000328596 ZNF496Q96IT1 587 aaPredicted RBP27.76■■■□□ 2.03
TNFRSF18-201ENST00000328596 MAPK8IP3Q9UPT6 1336 aa27.75■■■□□ 2.03
TNFRSF18-201ENST00000328596 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
TNFRSF18-201ENST00000328596 NFE2L2Q16236 605 aa27.74■■■□□ 2.03
TNFRSF18-201ENST00000328596 HEG1Q9ULI3 1381 aa27.73■■■□□ 2.03
TNFRSF18-201ENST00000328596 FMNL2Q96PY5 1086 aa27.73■■■□□ 2.03
TNFRSF18-201ENST00000328596 NLGN1Q8N2Q7 840 aa27.72■■■□□ 2.03
TNFRSF18-201ENST00000328596 C4AP0C0L4 1744 aa27.72■■■□□ 2.03
TNFRSF18-201ENST00000328596 KCNQ3O43525 872 aa27.71■■■□□ 2.03
TNFRSF18-201ENST00000328596 STARD3NLO95772 234 aa27.71■■■□□ 2.03
TNFRSF18-201ENST00000328596 GYS1P13807 737 aa27.71■■■□□ 2.03
TNFRSF18-201ENST00000328596 TEX13AQ9BXU3 409 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF18-201ENST00000328596 DLG5Q8TDM6 1919 aa27.71■■■□□ 2.03
TNFRSF18-201ENST00000328596 SOS1Q07889 1333 aaPredicted RBP27.7■■■□□ 2.03
TNFRSF18-201ENST00000328596 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
TNFRSF18-201ENST00000328596 ZBTB1Q9Y2K1 713 aa27.7■■■□□ 2.02
TNFRSF18-201ENST00000328596 CD2APQ9Y5K6 639 aa27.7■■■□□ 2.02
TNFRSF18-201ENST00000328596 MMP10P09238 476 aa27.69■■■□□ 2.02
TNFRSF18-201ENST00000328596 TAF7Q15545 349 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms