RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GNASQ5JWF2 1037 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 TAS1R3Q7RTX0 852 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 GLMNQ92990 594 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 ETNK1Q9HBU6 452 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 CDC14CA4D256 554 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 WASLO00401 505 aaPredicted RBP3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 GDF10P55107 478 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 PSME1Q06323 249 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 TLR1Q15399 786 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 TMEM214Q6NUQ4 689 aaKnown RBP3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 NBPF10Q6P3W6 841 aaKnown RBP3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 NBPF15Q8N660 670 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 NANOS1Q8WY41 292 aaKnown RBP3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 TOP2BQ02880 1626 aa3.39□□□□□ -1.87
CCDC144A-201ENST00000328495 ATP9BO43861 1147 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 GTF2IP78347 998 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 POU4F2Q12837 409 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 TRIM50Q86XT4 487 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 PLEKHM2Q8IWE5 1019 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 DYRK1BQ9Y463 629 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 USP17L3A6NCW0 530 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 USP17L4A6NCW7 530 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 INHAP05111 366 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 SCNN1DP51172 638 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 USP17L2Q6R6M4 530 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 SV2AQ7L0J3 742 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 USP17L1Q7RTZ2 530 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 CALR3Q96L12 384 aaKnown RBP3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 UCN2Q96RP3 112 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 FHDC1Q9C0D6 1143 aaPredicted RBP3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 TIMMDC1Q9NPL8 285 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 HRH3Q9Y5N1 445 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 DEPDC4Q8N2C3 294 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 GMCL1Q96IK5 515 aa3.38□□□□□ -1.87
CCDC144A-201ENST00000328495 ATP1A2P50993 1020 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 TBC1D9Q6ZT07 1266 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 RHBDD1Q8TEB9 315 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 H7C1W4 665 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 STAU1O95793 577 aaKnown RBP3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 RIPOR1Q6ZS17 1223 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 VWA5B2Q8N398 1253 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 GAS2L1Q99501 681 aaPredicted RBP3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 PCDHGA11Q9Y5H2 935 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 A0A1B0GTH6 734 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 BACH1O14867 736 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 PPARGC1BQ86YN6 1023 aaKnown RBP3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 TRIM22Q8IYM9 498 aa3.37□□□□□ -1.87
CCDC144A-201ENST00000328495 TMEM229AB2RXF0 380 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 SMTNP53814 917 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 FOXR1Q6PIV2 292 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 SERTAD1Q9UHV2 236 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 F11P03951 625 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 PHKA2P46019 1235 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 C4orf17Q53FE4 359 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 ZNF837Q96EG3 531 aaPredicted RBP3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 NIFKQ9BYG3 293 aaKnown RBP3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 STK17AQ9UEE5 414 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 RBM19Q9Y4C8 960 aaKnown RBP3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 SMARCA4P51532 1647 aa3.36□□□□□ -1.87
CCDC144A-201ENST00000328495 FAM181BA6NEQ2 426 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 ZSCAN1Q8NBB4 408 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 TPCN2Q8NHX9 752 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 SLC4A9Q96Q91 983 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 COL25A1Q9BXS0 654 aaPredicted RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 DNAAF2Q9NVR5 837 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 MKRN1Q9UHC7 482 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 MAFBQ9Y5Q3 323 aaPredicted RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 A6NJY4 79 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 CSB-PGBD3P0DP91 1061 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 PLA2G4AP47712 749 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 MTFR1Q15390 333 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 PGBD3Q8N328 593 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 GPR161Q8N6U8 529 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 PPP1R12CQ9BZL4 782 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 GPAMQ9HCL2 828 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 ZNF358Q9NW07 568 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 CUEDC1Q9NWM3 386 aaPredicted RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 TFIP11Q9UBB9 837 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 PALM3A6NDB9 673 aaPredicted RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 LBRQ14739 615 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 LARGE2Q8N3Y3 721 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 OGFOD1Q8N543 542 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 CNTNAP3BQ96NU0 1288 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 TRERF1Q96PN7 1200 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 CNTNAP3Q9BZ76 1288 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 NUCKS1Q9H1E3 243 aaKnown RBP3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 GTF3C3Q9Y5Q9 886 aa3.35□□□□□ -1.87
CCDC144A-201ENST00000328495 CDK2AP1O14519 115 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 NBPF1Q3BBV0 1214 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 CCDC102BQ68D86 513 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 CEP164Q9UPV0 1460 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 CLDN10P78369 228 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 DBN1Q16643 649 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 EFHC2Q5JST6 749 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 C1orf216Q8TAB5 229 aa3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 ZNF594Q96JF6 807 aaPredicted RBP3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 ZNF777Q9ULD5 760 aaPredicted RBP3.34□□□□□ -1.87
CCDC144A-201ENST00000328495 MSX1P28360 303 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms