RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 MPRIPQ6WCQ1 1025 aa23.75■■□□□ 1.39
FAM3A-201ENST00000322269 IFNL2Q8IZJ0 200 aa23.75■■□□□ 1.39
FAM3A-201ENST00000322269 ZCRB1Q8TBF4 217 aaKnown RBP23.75■■□□□ 1.39
FAM3A-201ENST00000322269 LGR6Q9HBX8 967 aa23.75■■□□□ 1.39
FAM3A-201ENST00000322269 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
FAM3A-201ENST00000322269 C8orf34Q49A92 452 aa23.74■■□□□ 1.39
FAM3A-201ENST00000322269 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
FAM3A-201ENST00000322269 RLBP1P12271 317 aa23.73■■□□□ 1.39
FAM3A-201ENST00000322269 FNBP4Q8N3X1 1017 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-201ENST00000322269 RNMTO43148 476 aaKnown RBP23.73■■□□□ 1.39
FAM3A-201ENST00000322269 SPATA31A1Q5TZJ5 1347 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 BCL9LQ86UU0 1499 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 CYP27B1O15528 508 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 ADAMTS7Q9UKP4 1686 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 DISP2A7MBM2 1401 aa23.72■■□□□ 1.39
FAM3A-201ENST00000322269 TAF7Q15545 349 aaPredicted RBP23.71■■□□□ 1.39
FAM3A-201ENST00000322269 DDRGK1Q96HY6 314 aa23.71■■□□□ 1.39
FAM3A-201ENST00000322269 THRAP3Q9Y2W1 955 aaKnown RBP23.71■■□□□ 1.39
FAM3A-201ENST00000322269 RGS3P49796 1198 aa23.7■■□□□ 1.39
FAM3A-201ENST00000322269 SPATA31A5Q5VU36 1347 aa23.7■■□□□ 1.39
FAM3A-201ENST00000322269 SPATA31A7Q8IWB4 1347 aa23.7■■□□□ 1.39
FAM3A-201ENST00000322269 KIF16BQ96L93 1317 aa23.7■■□□□ 1.39
FAM3A-201ENST00000322269 VAMP4O75379 141 aa23.7■■□□□ 1.38
FAM3A-201ENST00000322269 DZIP1LQ8IYY4 767 aaKnown RBP23.7■■□□□ 1.38
FAM3A-201ENST00000322269 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
FAM3A-201ENST00000322269 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
FAM3A-201ENST00000322269 SHANK3Q9BYB0 1731 aa23.69■■□□□ 1.38
FAM3A-201ENST00000322269 HSP90AB1P08238 724 aaKnown RBP23.69■■□□□ 1.38
FAM3A-201ENST00000322269 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
FAM3A-201ENST00000322269 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
FAM3A-201ENST00000322269 TSPYL4Q9UJ04 414 aa23.69■■□□□ 1.38
FAM3A-201ENST00000322269 SCN11AQ9UI33 1791 aa23.69■■□□□ 1.38
FAM3A-201ENST00000322269 IPO8O15397 1037 aaKnown RBP23.68■■□□□ 1.38
FAM3A-201ENST00000322269 TEFQ10587 303 aa23.68■■□□□ 1.38
FAM3A-201ENST00000322269 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
FAM3A-201ENST00000322269 ATF7IPQ6VMQ6 1270 aa23.68■■□□□ 1.38
FAM3A-201ENST00000322269 DCAF5Q96JK2 942 aa23.68■■□□□ 1.38
FAM3A-201ENST00000322269 KDM6AO15550 1401 aaPredicted RBP23.67■■□□□ 1.38
FAM3A-201ENST00000322269 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
FAM3A-201ENST00000322269 CDCA7Q9BWT1 371 aaPredicted RBP23.67■■□□□ 1.38
FAM3A-201ENST00000322269 USP21Q9UK80 565 aa23.67■■□□□ 1.38
FAM3A-201ENST00000322269 NOB1Q9ULX3 412 aaKnown RBP23.67■■□□□ 1.38
FAM3A-201ENST00000322269 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.67■■□□□ 1.38
FAM3A-201ENST00000322269 TRIM27P14373 513 aa23.66■■□□□ 1.38
FAM3A-201ENST00000322269 VPS72Q15906 364 aa23.66■■□□□ 1.38
FAM3A-201ENST00000322269 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
FAM3A-201ENST00000322269 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
FAM3A-201ENST00000322269 DDX54Q8TDD1 881 aaKnown RBP23.65■■□□□ 1.38
FAM3A-201ENST00000322269 BARGINQ6ZT62 677 aa23.64■■□□□ 1.38
FAM3A-201ENST00000322269 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.38
FAM3A-201ENST00000322269 SIPA1L3O60292 1781 aaPredicted RBP23.64■■□□□ 1.37
FAM3A-201ENST00000322269 NKX1-1Q15270 411 aaPredicted RBP23.63■■□□□ 1.37
FAM3A-201ENST00000322269 TSPYL6Q8N831 410 aa23.63■■□□□ 1.37
FAM3A-201ENST00000322269 EXOC5O00471 708 aa23.63■■□□□ 1.37
FAM3A-201ENST00000322269 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
FAM3A-201ENST00000322269 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
FAM3A-201ENST00000322269 AFF2P51816 1311 aa23.62■■□□□ 1.37
FAM3A-201ENST00000322269 BTBD11A6QL63 1104 aa23.62■■□□□ 1.37
FAM3A-201ENST00000322269 ELL2O00472 640 aaPredicted RBP23.62■■□□□ 1.37
FAM3A-201ENST00000322269 MRPL50Q8N5N7 158 aaKnown RBP23.61■■□□□ 1.37
FAM3A-201ENST00000322269 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
FAM3A-201ENST00000322269 KDM3BQ7LBC6 1761 aa23.61■■□□□ 1.37
FAM3A-201ENST00000322269 RWDD1Q9H446 243 aaPredicted RBP23.6■■□□□ 1.37
FAM3A-201ENST00000322269 DDX19BQ9UMR2 479 aa23.6■■□□□ 1.37
FAM3A-201ENST00000322269 TNS2Q63HR2 1409 aa23.6■■□□□ 1.37
FAM3A-201ENST00000322269 MRC1P22897 1456 aa23.59■■□□□ 1.37
FAM3A-201ENST00000322269 KRT24Q2M2I5 525 aa23.59■■□□□ 1.37
FAM3A-201ENST00000322269 NBR1Q14596 966 aa23.59■■□□□ 1.37
FAM3A-201ENST00000322269 NFATC2IPQ8NCF5 419 aa23.59■■□□□ 1.37
FAM3A-201ENST00000322269 DDB1Q16531 1140 aa23.58■■□□□ 1.37
FAM3A-201ENST00000322269 CABP4P57796 275 aa23.57■■□□□ 1.36
FAM3A-201ENST00000322269 ERVV-2B6SEH9 535 aa23.56■■□□□ 1.36
FAM3A-201ENST00000322269 FAM98CQ17RN3 349 aaKnown RBP23.56■■□□□ 1.36
FAM3A-201ENST00000322269 EIF4A1P60842 406 aaKnown RBP23.55■■□□□ 1.36
FAM3A-201ENST00000322269 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
FAM3A-201ENST00000322269 KCNQ3O43525 872 aa23.54■■□□□ 1.36
FAM3A-201ENST00000322269 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
FAM3A-201ENST00000322269 SOS1Q07889 1333 aaPredicted RBP23.54■■□□□ 1.36
FAM3A-201ENST00000322269 TRPC5Q9UL62 973 aaPredicted RBP23.53■■□□□ 1.36
FAM3A-201ENST00000322269 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
FAM3A-201ENST00000322269 ATRNO75882 1429 aa23.53■■□□□ 1.36
FAM3A-201ENST00000322269 GJD4Q96KN9 370 aaPredicted RBP23.52■■□□□ 1.36
FAM3A-201ENST00000322269 TOGARAM1Q9Y4F4 1720 aa23.52■■□□□ 1.36
FAM3A-201ENST00000322269 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
FAM3A-201ENST00000322269 GLI3P10071 1580 aa23.51■■□□□ 1.35
FAM3A-201ENST00000322269 HDAC1Q13547 482 aaPredicted RBP23.51■■□□□ 1.35
FAM3A-201ENST00000322269 ZBTB40Q9NUA8 1239 aa23.51■■□□□ 1.35
FAM3A-201ENST00000322269 CHMP4BQ9H444 224 aaKnown RBP23.5■■□□□ 1.35
FAM3A-201ENST00000322269 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
FAM3A-201ENST00000322269 ZNF772Q68DY9 489 aaPredicted RBP23.49■■□□□ 1.35
FAM3A-201ENST00000322269 API5Q9BZZ5 524 aaKnown RBP23.49■■□□□ 1.35
FAM3A-201ENST00000322269 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
FAM3A-201ENST00000322269 QTRT2Q9H974 415 aaKnown RBP23.49■■□□□ 1.35
FAM3A-201ENST00000322269 ABCC4O15439 1325 aa23.48■■□□□ 1.35
FAM3A-201ENST00000322269 HOXB7P09629 217 aa23.48■■□□□ 1.35
FAM3A-201ENST00000322269 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
FAM3A-201ENST00000322269 THSD7AQ9UPZ6 1657 aa23.48■■□□□ 1.35
FAM3A-201ENST00000322269 HEG1Q9ULI3 1381 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms