RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CAMK4Q16566 473 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 MAGEC2Q9UBF1 373 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-201ENST00000322213 ANO10Q9NW15 660 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
SMC1A-201ENST00000322213 SMC5Q8IY18 1101 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 PPM1EQ8WY54 764 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
SMC1A-201ENST00000322213 GNAI2P04899 355 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 FOSBP53539 338 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 TBC1D9Q6ZT07 1266 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 CPSF2Q9P2I0 782 aaKnown RBP8.24□□□□□ -1.09
SMC1A-201ENST00000322213 LAMC1P11047 1609 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
SMC1A-201ENST00000322213 STK38Q15208 465 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
SMC1A-201ENST00000322213 LIG1P18858 919 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 GOLIM4O00461 696 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 CCT4P50991 539 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 HNRNPMP52272 730 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 PARD3Q8TEW0 1356 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 NEXNQ0ZGT2 675 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 DDX19AQ9NUU7 478 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 RBM27Q9P2N5 1060 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■□□ 15.1
SMC1A-201ENST00000322213 IGF1RP08069 1367 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 UBTFL1P0CB47 393 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 XBP1P17861 261 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 SARNPP82979 210 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 MAST1Q9Y2H9 1570 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 AFDNP55196 1824 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 RALYLQ86SE5 291 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 COG3Q96JB2 828 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 ZNF500O60304 480 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 MX1P20591 662 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 STIM1Q13586 685 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 CFAP100Q494V2 611 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 ERC1Q8IUD2 1116 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 KDM5DQ9BY66 1539 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 GNAI3P08754 354 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 CEBPZQ03701 1054 aaKnown RBP8.23□□□□□ -1.09
SMC1A-201ENST00000322213 CCDC83Q8IWF9 413 aa8.23□□□□□ -1.09
SMC1A-201ENST00000322213 G3BP1Q13283 466 aaKnown RBP eCLIP8.22□□□□□ -1.098e-6■■□□□ 11.5
SMC1A-201ENST00000322213 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 STK11IPQ8N1F8 1099 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 PIBF1Q8WXW3 757 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 TOMM22Q9NS69 142 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 CAPN2P17655 700 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 RARSP54136 660 aaKnown RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 ALDH1L2Q3SY69 923 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 HCLS1P14317 486 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 NFXL1Q6ZNB6 911 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 ANKS4BQ8N8V4 417 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 MRVI1Q9Y6F6 885 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 ITSN1Q15811 1721 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 SOX12O15370 315 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 KRBA2Q6ZNG9 492 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 ELL2O00472 640 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 TXLNAP40222 546 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 GBP6Q6ZN66 633 aa8.22□□□□□ -1.09
SMC1A-201ENST00000322213 SMARCC1Q92922 1105 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 SLU7O95391 586 aaKnown RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 HDAC1Q13547 482 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-201ENST00000322213 NUCB1Q02818 461 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 IMMTQ16891 758 aaKnown RBP8.21□□□□□ -1.09
SMC1A-201ENST00000322213 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 ERICH2A1L162 156 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 ZNF445P59923 1031 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 EFCC1Q9HA90 598 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 FAM200AQ8TCP9 573 aa8.21□□□□□ -1.09
SMC1A-201ENST00000322213 C10orf67Q8IYJ2 551 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 RSPH14Q9UHP6 348 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 NUMA1Q14980 2115 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 SKAP1Q86WV1 359 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 PDRG1Q9NUG6 133 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 TOP1P11387 765 aaKnown RBP8.21□□□□□ -1.1
SMC1A-201ENST00000322213 TMEM57Q8N5G2 664 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 INSRP06213 1382 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 NEFHP12036 1026 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 TICAM2Q86XR7 235 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 CEP112Q8N8E3 955 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 STX6O43752 255 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 MTHFSP49914 203 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 LRCH2Q5VUJ6 765 aa8.21□□□□□ -1.1
SMC1A-201ENST00000322213 PAIP2Q9BPZ3 127 aaKnown RBP8.21□□□□□ -1.1
SMC1A-201ENST00000322213 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 KRT32Q14532 448 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 EHBP1Q8NDI1 1231 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 ABCC2Q92887 1545 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 URI1O94763 535 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-201ENST00000322213 CITO14578 2027 aa8.2□□□□□ -1.1
SMC1A-201ENST00000322213 SETSIPP0DME0 302 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms