RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
LINC00476-201ENST00000321517 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
LINC00476-201ENST00000321517 AMER1Q5JTC6 1135 aaPredicted RBP22.42■■□□□ 1.18
LINC00476-201ENST00000321517 AEBP1Q8IUX7 1158 aa22.42■■□□□ 1.18
LINC00476-201ENST00000321517 ATP6V1AP38606 617 aa22.41■■□□□ 1.18
LINC00476-201ENST00000321517 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
LINC00476-201ENST00000321517 CD2APQ9Y5K6 639 aa22.39■■□□□ 1.17
LINC00476-201ENST00000321517 HMGB2P26583 209 aaKnown RBP22.38■■□□□ 1.17
LINC00476-201ENST00000321517 ERVV-2B6SEH9 535 aa22.37■■□□□ 1.17
LINC00476-201ENST00000321517 SSFA2P28290 1259 aa22.37■■□□□ 1.17
LINC00476-201ENST00000321517 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
LINC00476-201ENST00000321517 KDM6AO15550 1401 aaPredicted RBP22.37■■□□□ 1.17
LINC00476-201ENST00000321517 GNPATO15228 680 aa22.36■■□□□ 1.17
LINC00476-201ENST00000321517 ZNF530Q6P9A1 599 aaPredicted RBP22.36■■□□□ 1.17
LINC00476-201ENST00000321517 KDRP35968 1356 aa22.36■■□□□ 1.17
LINC00476-201ENST00000321517 IL13P35225 146 aa22.35■■□□□ 1.17
LINC00476-201ENST00000321517 DCAF5Q96JK2 942 aa22.35■■□□□ 1.17
LINC00476-201ENST00000321517 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
LINC00476-201ENST00000321517 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
LINC00476-201ENST00000321517 GRIN3BO60391 1043 aa22.33■■□□□ 1.17
LINC00476-201ENST00000321517 SULT6B1Q6IMI4 303 aa22.33■■□□□ 1.17
LINC00476-201ENST00000321517 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
LINC00476-201ENST00000321517 RALBP1Q15311 655 aa22.32■■□□□ 1.16
LINC00476-201ENST00000321517 AMOTQ4VCS5 1084 aa22.32■■□□□ 1.16
LINC00476-201ENST00000321517 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
LINC00476-201ENST00000321517 CABP4P57796 275 aa22.31■■□□□ 1.16
LINC00476-201ENST00000321517 C1QTNF8P60827 252 aa22.31■■□□□ 1.16
LINC00476-201ENST00000321517 MTHFSP49914 203 aa22.3■■□□□ 1.16
LINC00476-201ENST00000321517 MYH14Q7Z406 1995 aaKnown RBP22.3■■□□□ 1.16
LINC00476-201ENST00000321517 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
LINC00476-201ENST00000321517 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
LINC00476-201ENST00000321517 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
LINC00476-201ENST00000321517 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
LINC00476-201ENST00000321517 ARHGEF1Q92888 912 aaKnown RBP22.28■■□□□ 1.16
LINC00476-201ENST00000321517 PTCD1O75127 700 aaKnown RBP22.27■■□□□ 1.16
LINC00476-201ENST00000321517 MMP10P09238 476 aa22.27■■□□□ 1.16
LINC00476-201ENST00000321517 RTCBQ9Y3I0 505 aaKnown RBP22.27■■□□□ 1.16
LINC00476-201ENST00000321517 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
LINC00476-201ENST00000321517 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
LINC00476-201ENST00000321517 C1orf141Q5JVX7 400 aa22.26■■□□□ 1.15
LINC00476-201ENST00000321517 RPS6KA4O75676 772 aa22.25■■□□□ 1.15
LINC00476-201ENST00000321517 LGR6Q9HBX8 967 aa22.25■■□□□ 1.15
LINC00476-201ENST00000321517 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
LINC00476-201ENST00000321517 ANP32CO43423 234 aa22.24■■□□□ 1.15
LINC00476-201ENST00000321517 HMOX1P09601 288 aa22.23■■□□□ 1.15
LINC00476-201ENST00000321517 GYS1P13807 737 aa22.23■■□□□ 1.15
LINC00476-201ENST00000321517 ATP10DQ9P241 1426 aa22.22■■□□□ 1.15
LINC00476-201ENST00000321517 SCN11AQ9UI33 1791 aa22.21■■□□□ 1.15
LINC00476-201ENST00000321517 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
LINC00476-201ENST00000321517 GIGYF1O75420 1035 aaPredicted RBP22.21■■□□□ 1.15
LINC00476-201ENST00000321517 NLGN1Q8N2Q7 840 aa22.21■■□□□ 1.15
LINC00476-201ENST00000321517 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
LINC00476-201ENST00000321517 KIAA1551Q9HCM1 1747 aa22.2■■□□□ 1.14
LINC00476-201ENST00000321517 ADRA2BP18089 450 aa22.2■■□□□ 1.14
LINC00476-201ENST00000321517 CRKLP46109 303 aaKnown RBP22.2■■□□□ 1.14
LINC00476-201ENST00000321517 AKAP4Q5JQC9 854 aa22.2■■□□□ 1.14
LINC00476-201ENST00000321517 SRP68Q9UHB9 627 aaKnown RBP22.2■■□□□ 1.14
LINC00476-201ENST00000321517 A0A0G2JLW4 131 aa22.19■■□□□ 1.14
LINC00476-201ENST00000321517 RFC4P35249 363 aa22.19■■□□□ 1.14
LINC00476-201ENST00000321517 INTS5Q6P9B9 1019 aaKnown RBP22.19■■□□□ 1.14
LINC00476-201ENST00000321517 PXDNLA1KZ92 1463 aa22.19■■□□□ 1.14
LINC00476-201ENST00000321517 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
LINC00476-201ENST00000321517 KIF13BQ9NQT8 1826 aa22.18■■□□□ 1.14
LINC00476-201ENST00000321517 N4BP2Q86UW6 1770 aaPredicted RBP22.18■■□□□ 1.14
LINC00476-201ENST00000321517 ADCY9O60503 1353 aa22.18■■□□□ 1.14
LINC00476-201ENST00000321517 MTHFSDQ2M296 383 aaKnown RBP22.18■■□□□ 1.14
LINC00476-201ENST00000321517 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
LINC00476-201ENST00000321517 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
LINC00476-201ENST00000321517 TJP1Q07157 1748 aa22.17■■□□□ 1.14
LINC00476-201ENST00000321517 MYBBP1AQ9BQG0 1328 aaKnown RBP22.17■■□□□ 1.14
LINC00476-201ENST00000321517 RNMTO43148 476 aaKnown RBP22.17■■□□□ 1.14
LINC00476-201ENST00000321517 SLC39A6Q13433 755 aa22.17■■□□□ 1.14
LINC00476-201ENST00000321517 C4AP0C0L4 1744 aa22.17■■□□□ 1.14
LINC00476-201ENST00000321517 CNGB1Q14028 1251 aaPredicted RBP22.16■■□□□ 1.14
LINC00476-201ENST00000321517 DNAJC10Q8IXB1 793 aa22.16■■□□□ 1.14
LINC00476-201ENST00000321517 C10orf71Q711Q0 1435 aa22.15■■□□□ 1.14
LINC00476-201ENST00000321517 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
LINC00476-201ENST00000321517 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
LINC00476-201ENST00000321517 FKBP8Q14318 412 aa22.15■■□□□ 1.14
LINC00476-201ENST00000321517 DPEP1P16444 411 aa22.14■■□□□ 1.13
LINC00476-201ENST00000321517 TGFB2P61812 414 aa22.14■■□□□ 1.13
LINC00476-201ENST00000321517 ZNF526Q8TF50 670 aaPredicted RBP22.14■■□□□ 1.13
LINC00476-201ENST00000321517 KCNA3P22001 575 aa22.13■■□□□ 1.13
LINC00476-201ENST00000321517 DDR1Q08345 913 aa22.13■■□□□ 1.13
LINC00476-201ENST00000321517 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
LINC00476-201ENST00000321517 ADAMTS7Q9UKP4 1686 aa22.13■■□□□ 1.13
LINC00476-201ENST00000321517 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
LINC00476-201ENST00000321517 USP42Q9H9J4 1324 aaKnown RBP22.12■■□□□ 1.13
LINC00476-201ENST00000321517 PARP3Q9Y6F1 533 aa22.12■■□□□ 1.13
LINC00476-201ENST00000321517 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
LINC00476-201ENST00000321517 CYP19A1P11511 503 aaPredicted RBP22.11■■□□□ 1.13
LINC00476-201ENST00000321517 GPBP1L1Q9HC44 474 aaPredicted RBP22.11■■□□□ 1.13
LINC00476-201ENST00000321517 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
LINC00476-201ENST00000321517 BCS1LQ9Y276 419 aa22.11■■□□□ 1.13
LINC00476-201ENST00000321517 MRC1P22897 1456 aa22.1■■□□□ 1.13
LINC00476-201ENST00000321517 TM4SF1P30408 202 aa22.09■■□□□ 1.13
LINC00476-201ENST00000321517 KCPQ6ZWJ8 1503 aa22.09■■□□□ 1.13
LINC00476-201ENST00000321517 CEP350Q5VT06 3117 aa22.08■■□□□ 1.13
LINC00476-201ENST00000321517 SOS1Q07889 1333 aaPredicted RBP22.07■■□□□ 1.12
LINC00476-201ENST00000321517 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms