RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
SMCHD1-201ENST00000320876 SEC63Q9UGP8 760 aaKnown RBP19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 BCAR3O75815 825 aa19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 ATF3P18847 181 aa19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 CCDC97Q96F63 343 aaPredicted RBP19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 NKTRP30414 1462 aaKnown RBP19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 IVLP07476 585 aa19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 CAVIN2O95810 425 aa19.59■□□□□ 0.73
SMCHD1-201ENST00000320876 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.73
SMCHD1-201ENST00000320876 IPO4Q8TEX9 1081 aaKnown RBP19.58■□□□□ 0.73
SMCHD1-201ENST00000320876 EHBP1Q8NDI1 1231 aa19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 CFAP57Q96MR6 1250 aa19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 NCOA2Q15596 1464 aa19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 YEATS4O95619 227 aa19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 GTF2F1P35269 517 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 STX1AQ16623 288 aa19.58■□□□□ 0.72
SMCHD1-201ENST00000320876 ZNF76P36508 570 aa19.57■□□□□ 0.72
SMCHD1-201ENST00000320876 MNAT1P51948 309 aa19.57■□□□□ 0.72
SMCHD1-201ENST00000320876 CCDC150Q8NCX0 1101 aa19.57■□□□□ 0.72
SMCHD1-201ENST00000320876 TSR2Q969E8 191 aaKnown RBP19.57■□□□□ 0.72
SMCHD1-201ENST00000320876 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
SMCHD1-201ENST00000320876 CEP112Q8N8E3 955 aa19.56■□□□□ 0.72
SMCHD1-201ENST00000320876 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
SMCHD1-201ENST00000320876 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
SMCHD1-201ENST00000320876 SPECC1Q5M775 1068 aa19.56■□□□□ 0.72
SMCHD1-201ENST00000320876 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
SMCHD1-201ENST00000320876 PTPRGP23470 1445 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 LMAN1P49257 510 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 CCDC196A0A1B0GTZ2 297 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 DDX12PQ92771 950 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 BMS1Q14692 1282 aaKnown RBP19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 DNAAF4Q8WXU2 420 aa19.55■□□□□ 0.72
SMCHD1-201ENST00000320876 TNIP1Q15025 636 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 ANKS4BQ8N8V4 417 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 HSPA4P34932 840 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 ERBINQ96RT1 1412 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 RAB34Q9BZG1 259 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 HLTFQ14527 1009 aaKnown RBP eCLIP19.54■□□□□ 0.723e-6■■□□□ 11.8
SMCHD1-201ENST00000320876 KLHL10Q6JEL2 608 aa19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 HMGB1P09429 215 aaKnown RBP19.54■□□□□ 0.72
SMCHD1-201ENST00000320876 NLRP6P59044 892 aa19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 IBSPP21815 317 aaPredicted RBP19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 GTF2A1P52655 376 aaPredicted RBP19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 KRT222Q8N1A0 295 aa19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 FSD2A1L4K1 749 aa19.53■□□□□ 0.72
SMCHD1-201ENST00000320876 RAB11FIP3O75154 756 aa19.52■□□□□ 0.72
SMCHD1-201ENST00000320876 CTNNBL1Q8WYA6 563 aaPredicted RBP19.52■□□□□ 0.72
SMCHD1-201ENST00000320876 NBPF1Q3BBV0 1214 aa19.52■□□□□ 0.72
SMCHD1-201ENST00000320876 CEP135Q66GS9 1140 aa19.52■□□□□ 0.72
SMCHD1-201ENST00000320876 ZHX1Q9UKY1 873 aaPredicted RBP19.52■□□□□ 0.71
SMCHD1-201ENST00000320876 HFM1A2PYH4 1435 aa19.52■□□□□ 0.71
SMCHD1-201ENST00000320876 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.71
SMCHD1-201ENST00000320876 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 HSF2BPO75031 334 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 AIDAQ96BJ3 306 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 ADCY5O95622 1261 aa19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 NSRP1Q9H0G5 558 aaKnown RBP19.51■□□□□ 0.71
SMCHD1-201ENST00000320876 MAATS1Q7Z4T9 603 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 DDX19AQ9NUU7 478 aaKnown RBP19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 FAM114A1Q8IWE2 563 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 KIF20AO95235 890 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 SREK1Q8WXA9 508 aaKnown RBP19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 PPP4R3AQ6IN85 833 aa19.5■□□□□ 0.71
SMCHD1-201ENST00000320876 FERP16591 822 aa19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 CTNNA2P26232 953 aa19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 DDX23Q9BUQ8 820 aaKnown RBP19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
SMCHD1-201ENST00000320876 TMEM266Q2M3C6 531 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 UBE2Q2Q8WVN8 375 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 IKBKGQ9Y6K9 419 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 CETN1Q12798 172 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 MX1P20591 662 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 MSL1Q68DK7 614 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 PYM1Q9BRP8 204 aaKnown RBP19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 TRMT1Q9NXH9 659 aaKnown RBP19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 ANKRD30BQ9BXX2 1392 aa19.48■□□□□ 0.71
SMCHD1-201ENST00000320876 CKAP4Q07065 602 aaKnown RBP19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 MACROD2A1Z1Q3 448 aa19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 IFI16Q16666 785 aaKnown RBP19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 CNNM3Q8NE01 707 aa19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 ARFGAP3Q9NP61 516 aa19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 TMC6Q7Z403 805 aa19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
SMCHD1-201ENST00000320876 RPAP2Q8IXW5 612 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms