RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
SCAP-202ENST00000320017 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
SCAP-202ENST00000320017 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
SCAP-202ENST00000320017 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
SCAP-202ENST00000320017 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
SCAP-202ENST00000320017 CAPN2P17655 700 aa18.02■□□□□ 0.48
SCAP-202ENST00000320017 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
SCAP-202ENST00000320017 RTF1Q92541 710 aaKnown RBP18.02■□□□□ 0.48
SCAP-202ENST00000320017 SECISBP2LQ93073 1101 aaKnown RBP18.02■□□□□ 0.48
SCAP-202ENST00000320017 ST7Q9NRC1 585 aa18.02■□□□□ 0.48
SCAP-202ENST00000320017 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
SCAP-202ENST00000320017 NEK4P51957 841 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 KIAA1524Q8TCG1 905 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 LAMC1P11047 1609 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 GOLGA6L6A8MZA4 724 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
SCAP-202ENST00000320017 LMOD2Q6P5Q4 547 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 DDX41Q9UJV9 622 aaKnown RBP18.01■□□□□ 0.47
SCAP-202ENST00000320017 MYOM1P52179 1685 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
SCAP-202ENST00000320017 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
SCAP-202ENST00000320017 TNNT1P13805 278 aa18■□□□□ 0.47
SCAP-202ENST00000320017 CCDC27Q2M243 656 aa18■□□□□ 0.47
SCAP-202ENST00000320017 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
SCAP-202ENST00000320017 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
SCAP-202ENST00000320017 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
SCAP-202ENST00000320017 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
SCAP-202ENST00000320017 PTGS1P23219 599 aa17.99■□□□□ 0.47
SCAP-202ENST00000320017 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
SCAP-202ENST00000320017 C8orf58Q8NAV2 365 aa17.99■□□□□ 0.47
SCAP-202ENST00000320017 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
SCAP-202ENST00000320017 GLI2P10070 1586 aa17.98■□□□□ 0.47
SCAP-202ENST00000320017 UVSSAQ2YD98 709 aa17.98■□□□□ 0.47
SCAP-202ENST00000320017 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
SCAP-202ENST00000320017 COG3Q96JB2 828 aa17.98■□□□□ 0.47
SCAP-202ENST00000320017 KDM4AO75164 1064 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 KIF18AQ8NI77 898 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 TPD52L1Q16890 204 aaPredicted RBP17.97■□□□□ 0.47
SCAP-202ENST00000320017 TWISTNBQ3B726 338 aaPredicted RBP17.97■□□□□ 0.47
SCAP-202ENST00000320017 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 USP48Q86UV5 1035 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 CTIFO43310 598 aaKnown RBP17.97■□□□□ 0.47
SCAP-202ENST00000320017 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
SCAP-202ENST00000320017 ADGRB1O14514 1584 aa17.96■□□□□ 0.47
SCAP-202ENST00000320017 NRXN1Q9ULB1 1477 aa17.96■□□□□ 0.47
SCAP-202ENST00000320017 INTS3Q68E01 1043 aaKnown RBP17.96■□□□□ 0.47
SCAP-202ENST00000320017 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
SCAP-202ENST00000320017 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
SCAP-202ENST00000320017 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
SCAP-202ENST00000320017 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 FIBPO43427 364 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 DTNBO60941 627 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 TMX3Q96JJ7 454 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
SCAP-202ENST00000320017 GSPT1P15170 499 aaKnown RBP17.95■□□□□ 0.46
SCAP-202ENST00000320017 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
SCAP-202ENST00000320017 LRMPQ12912 555 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 CCDC183Q5T5S1 534 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 HNRNPH2P55795 449 aaKnown RBP17.94■□□□□ 0.46
SCAP-202ENST00000320017 MCM10Q7L590 875 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 TEX2Q8IWB9 1127 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 SIRT2Q8IXJ6 389 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 THEMISQ8N1K5 641 aaPredicted RBP17.94■□□□□ 0.46
SCAP-202ENST00000320017 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 ZBTB7BO15156 539 aaPredicted RBP17.94■□□□□ 0.46
SCAP-202ENST00000320017 VAMP4O75379 141 aa17.94■□□□□ 0.46
SCAP-202ENST00000320017 NOL10Q9BSC4 688 aaKnown RBP17.94■□□□□ 0.46
SCAP-202ENST00000320017 RSPH14Q9UHP6 348 aa17.93■□□□□ 0.46
SCAP-202ENST00000320017 SMTNL1A8MU46 457 aa17.93■□□□□ 0.46
SCAP-202ENST00000320017 APPP05067 770 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 MORC2Q9Y6X9 1032 aaPredicted RBP17.92■□□□□ 0.46
SCAP-202ENST00000320017 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 TSPYL1Q9H0U9 437 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
SCAP-202ENST00000320017 TULP4Q9NRJ4 1543 aa17.91■□□□□ 0.46
SCAP-202ENST00000320017 POLR3GO15318 223 aaPredicted RBP17.91■□□□□ 0.46
SCAP-202ENST00000320017 TPM3P06753 285 aa17.91■□□□□ 0.46
SCAP-202ENST00000320017 ZNF397Q8NF99 534 aaPredicted RBP17.91■□□□□ 0.46
SCAP-202ENST00000320017 FEZ2Q9UHY8 353 aaPredicted RBP17.9■□□□□ 0.46
SCAP-202ENST00000320017 BRD1O95696 1058 aa17.9■□□□□ 0.46
SCAP-202ENST00000320017 MRPL50Q8N5N7 158 aaKnown RBP17.9■□□□□ 0.46
SCAP-202ENST00000320017 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
SCAP-202ENST00000320017 PREX1Q8TCU6 1659 aa17.9■□□□□ 0.46
SCAP-202ENST00000320017 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
SCAP-202ENST00000320017 F6X3S4 739 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 SLC20A2Q08357 652 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 ELF2Q15723 593 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 KMT5BQ4FZB7 885 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 C10orf67Q8IYJ2 551 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 PPLO60437 1756 aa17.89■□□□□ 0.46
SCAP-202ENST00000320017 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
SCAP-202ENST00000320017 REC8O95072 547 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms