RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ATG3Q9NT62 314 aa19.61■□□□□ 0.73
RPP40-201ENST00000319533 SENP3-EIF4A1A0A087X0R7 540 aa19.6■□□□□ 0.73
RPP40-201ENST00000319533 PHF14O94880 888 aa19.6■□□□□ 0.73
RPP40-201ENST00000319533 SMIM5Q71RC9 77 aa19.6■□□□□ 0.73
RPP40-201ENST00000319533 ZNF831Q5JPB2 1677 aa19.59■□□□□ 0.73
RPP40-201ENST00000319533 KDRP35968 1356 aa19.58■□□□□ 0.73
RPP40-201ENST00000319533 ERVV-2B6SEH9 535 aa19.58■□□□□ 0.72
RPP40-201ENST00000319533 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
RPP40-201ENST00000319533 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.72
RPP40-201ENST00000319533 GNPATO15228 680 aa19.57■□□□□ 0.72
RPP40-201ENST00000319533 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
RPP40-201ENST00000319533 PANK3Q9H999 370 aa19.57■□□□□ 0.72
RPP40-201ENST00000319533 ADCY9O60503 1353 aa19.57■□□□□ 0.72
RPP40-201ENST00000319533 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
RPP40-201ENST00000319533 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
RPP40-201ENST00000319533 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
RPP40-201ENST00000319533 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
RPP40-201ENST00000319533 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
RPP40-201ENST00000319533 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
RPP40-201ENST00000319533 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
RPP40-201ENST00000319533 RC3H1Q5TC82 1133 aaKnown RBP19.54■□□□□ 0.72
RPP40-201ENST00000319533 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
RPP40-201ENST00000319533 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
RPP40-201ENST00000319533 CCER1Q8TC90 406 aaPredicted RBP19.52■□□□□ 0.72
RPP40-201ENST00000319533 KIF13BQ9NQT8 1826 aa19.51■□□□□ 0.71
RPP40-201ENST00000319533 RTCBQ9Y3I0 505 aaKnown RBP19.51■□□□□ 0.71
RPP40-201ENST00000319533 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
RPP40-201ENST00000319533 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
RPP40-201ENST00000319533 MMP10P09238 476 aa19.5■□□□□ 0.71
RPP40-201ENST00000319533 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
RPP40-201ENST00000319533 NLGN1Q8N2Q7 840 aa19.5■□□□□ 0.71
RPP40-201ENST00000319533 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
RPP40-201ENST00000319533 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
RPP40-201ENST00000319533 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 CABP4P57796 275 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 TGFB2P61812 414 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 MORC1Q86VD1 984 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 AEBP1Q8IUX7 1158 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 ARHGEF1Q92888 912 aaKnown RBP19.48■□□□□ 0.71
RPP40-201ENST00000319533 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
RPP40-201ENST00000319533 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
RPP40-201ENST00000319533 PXDNLA1KZ92 1463 aa19.48■□□□□ 0.71
RPP40-201ENST00000319533 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
RPP40-201ENST00000319533 C10orf71Q711Q0 1435 aa19.46■□□□□ 0.71
RPP40-201ENST00000319533 NPM3O75607 178 aaKnown RBP19.46■□□□□ 0.71
RPP40-201ENST00000319533 GYS1P13807 737 aa19.46■□□□□ 0.71
RPP40-201ENST00000319533 IL13P35225 146 aa19.46■□□□□ 0.71
RPP40-201ENST00000319533 MTHFSP49914 203 aa19.46■□□□□ 0.71
RPP40-201ENST00000319533 MYH14Q7Z406 1995 aaKnown RBP19.45■□□□□ 0.7
RPP40-201ENST00000319533 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
RPP40-201ENST00000319533 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
RPP40-201ENST00000319533 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
RPP40-201ENST00000319533 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
RPP40-201ENST00000319533 C4AP0C0L4 1744 aa19.43■□□□□ 0.7
RPP40-201ENST00000319533 RFC4P35249 363 aa19.43■□□□□ 0.7
RPP40-201ENST00000319533 AMER1Q5JTC6 1135 aaPredicted RBP19.43■□□□□ 0.7
RPP40-201ENST00000319533 NFATC2IPQ8NCF5 419 aa19.43■□□□□ 0.7
RPP40-201ENST00000319533 CCDC87Q9NVE4 849 aa19.42■□□□□ 0.7
RPP40-201ENST00000319533 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
RPP40-201ENST00000319533 TJP1Q07157 1748 aa19.4■□□□□ 0.7
RPP40-201ENST00000319533 SCN11AQ9UI33 1791 aa19.4■□□□□ 0.7
RPP40-201ENST00000319533 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
RPP40-201ENST00000319533 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
RPP40-201ENST00000319533 CRKLP46109 303 aaKnown RBP19.4■□□□□ 0.7
RPP40-201ENST00000319533 AKAP4Q5JQC9 854 aa19.39■□□□□ 0.69
RPP40-201ENST00000319533 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
RPP40-201ENST00000319533 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
RPP40-201ENST00000319533 PARP3Q9Y6F1 533 aa19.39■□□□□ 0.69
RPP40-201ENST00000319533 BRCA1P38398 1863 aaKnown RBP19.39■□□□□ 0.69
RPP40-201ENST00000319533 KIF3CO14782 793 aa19.38■□□□□ 0.69
RPP40-201ENST00000319533 DPEP1P16444 411 aa19.38■□□□□ 0.69
RPP40-201ENST00000319533 USP42Q9H9J4 1324 aaKnown RBP19.38■□□□□ 0.69
RPP40-201ENST00000319533 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
RPP40-201ENST00000319533 HSPA6P17066 643 aa19.37■□□□□ 0.69
RPP40-201ENST00000319533 KCNA3P22001 575 aa19.37■□□□□ 0.69
RPP40-201ENST00000319533 HOXD11P31277 338 aaPredicted RBP19.37■□□□□ 0.69
RPP40-201ENST00000319533 INTS5Q6P9B9 1019 aaKnown RBP19.37■□□□□ 0.69
RPP40-201ENST00000319533 BCS1LQ9Y276 419 aa19.37■□□□□ 0.69
RPP40-201ENST00000319533 MRC1P22897 1456 aa19.36■□□□□ 0.69
RPP40-201ENST00000319533 FKBP8Q14318 412 aa19.36■□□□□ 0.69
RPP40-201ENST00000319533 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
RPP40-201ENST00000319533 KIF7Q2M1P5 1343 aa19.35■□□□□ 0.69
RPP40-201ENST00000319533 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
RPP40-201ENST00000319533 PER1O15534 1290 aaPredicted RBP19.34■□□□□ 0.69
RPP40-201ENST00000319533 TM4SF1P30408 202 aa19.34■□□□□ 0.69
RPP40-201ENST00000319533 DDR1Q08345 913 aa19.34■□□□□ 0.69
RPP40-201ENST00000319533 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
RPP40-201ENST00000319533 ARFGEF1Q9Y6D6 1849 aa19.33■□□□□ 0.69
RPP40-201ENST00000319533 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.68
RPP40-201ENST00000319533 FCHSD2O94868 740 aa19.33■□□□□ 0.68
RPP40-201ENST00000319533 ARHGAP27Q6ZUM4 889 aa19.33■□□□□ 0.68
RPP40-201ENST00000319533 DNAJC10Q8IXB1 793 aa19.32■□□□□ 0.68
RPP40-201ENST00000319533 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
RPP40-201ENST00000319533 SOS1Q07889 1333 aaPredicted RBP19.31■□□□□ 0.68
RPP40-201ENST00000319533 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
RPP40-201ENST00000319533 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
RPP40-201ENST00000319533 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
RPP40-201ENST00000319533 HMOX1P09601 288 aa19.29■□□□□ 0.68
RPP40-201ENST00000319533 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms