RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 WDR97A6NE52 1622 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
RAPH1-202ENST00000319170 DNA2P51530 1060 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 CACNA2D4Q7Z3S7 1137 aa16.46■□□□□ 0.23
RAPH1-202ENST00000319170 ZSCAN12O43309 604 aa16.46■□□□□ 0.22
RAPH1-202ENST00000319170 NUP88Q99567 741 aaPredicted RBP16.46■□□□□ 0.22
RAPH1-202ENST00000319170 GBP3Q9H0R5 595 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 SFPQP23246 707 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAPH1-202ENST00000319170 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
RAPH1-202ENST00000319170 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
RAPH1-202ENST00000319170 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 PRDM10Q9NQV6 1147 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
RAPH1-202ENST00000319170 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
RAPH1-202ENST00000319170 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 FAM135AQ9P2D6 1515 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
RAPH1-202ENST00000319170 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 TNNT1P13805 278 aa16.44■□□□□ 0.22
RAPH1-202ENST00000319170 RNF187Q5TA31 235 aaPredicted RBP16.44■□□□□ 0.22
RAPH1-202ENST00000319170 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
RAPH1-202ENST00000319170 CFTRP13569 1480 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 KIF2AO00139 706 aaPredicted RBP16.43■□□□□ 0.22
RAPH1-202ENST00000319170 FGFR1OPO95684 399 aaKnown RBP16.43■□□□□ 0.22
RAPH1-202ENST00000319170 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
RAPH1-202ENST00000319170 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
RAPH1-202ENST00000319170 ESPNB1AK53 854 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 CBX1P83916 185 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 MCM4P33991 863 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 CIZ1Q9ULV3 898 aaPredicted RBP16.42■□□□□ 0.22
RAPH1-202ENST00000319170 ANKIB1Q9P2G1 1089 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
RAPH1-202ENST00000319170 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
RAPH1-202ENST00000319170 HOOK3Q86VS8 718 aa16.41■□□□□ 0.22
RAPH1-202ENST00000319170 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
RAPH1-202ENST00000319170 ANO10Q9NW15 660 aa16.41■□□□□ 0.22
RAPH1-202ENST00000319170 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
RAPH1-202ENST00000319170 TMOD2Q9NZR1 351 aa16.41■□□□□ 0.22
RAPH1-202ENST00000319170 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
RAPH1-202ENST00000319170 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 ANKRD30BQ9BXX2 1392 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
RAPH1-202ENST00000319170 PDIA4P13667 645 aaKnown RBP16.4■□□□□ 0.22
RAPH1-202ENST00000319170 CCDC96Q2M329 555 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 CUL5Q93034 780 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 SSRP1Q08945 709 aaKnown RBP16.39■□□□□ 0.21
RAPH1-202ENST00000319170 CTNNA2P26232 953 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 MICALCLQ6ZW33 695 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 PSMD1Q99460 953 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
RAPH1-202ENST00000319170 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
RAPH1-202ENST00000319170 TMEM266Q2M3C6 531 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 RAB11FIP3O75154 756 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
RAPH1-202ENST00000319170 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 ALS2CR12Q96Q35 445 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
RAPH1-202ENST00000319170 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 ZSCAN30Q86W11 494 aa16.38■□□□□ 0.21
RAPH1-202ENST00000319170 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
RAPH1-202ENST00000319170 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
RAPH1-202ENST00000319170 NAPBQ9H115 298 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms