RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 NHSL1Q5SYE7 1610 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 TRIM27P14373 513 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 PANK2Q9BZ23 570 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 AKAP4Q5JQC9 854 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 C1orf141Q5JVX7 400 aa19.86■□□□□ 0.77
USH1C-202ENST00000318024 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
USH1C-202ENST00000318024 CLCN1P35523 988 aa19.85■□□□□ 0.77
USH1C-202ENST00000318024 TOM1L2Q6ZVM7 507 aa19.85■□□□□ 0.77
USH1C-202ENST00000318024 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
USH1C-202ENST00000318024 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
USH1C-202ENST00000318024 TATP17735 454 aaPredicted RBP19.84■□□□□ 0.77
USH1C-202ENST00000318024 ATF7IPQ6VMQ6 1270 aa19.84■□□□□ 0.77
USH1C-202ENST00000318024 DZIP1LQ8IYY4 767 aaKnown RBP19.84■□□□□ 0.77
USH1C-202ENST00000318024 MRPL50Q8N5N7 158 aaKnown RBP19.84■□□□□ 0.77
USH1C-202ENST00000318024 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
USH1C-202ENST00000318024 TRAK2O60296 914 aa19.83■□□□□ 0.77
USH1C-202ENST00000318024 TOM1O60784 492 aa19.83■□□□□ 0.76
USH1C-202ENST00000318024 EVA1CP58658 441 aa19.83■□□□□ 0.76
USH1C-202ENST00000318024 SMC5Q8IY18 1101 aa19.83■□□□□ 0.76
USH1C-202ENST00000318024 ZNF428Q96B54 188 aa19.83■□□□□ 0.76
USH1C-202ENST00000318024 LARP1Q6PKG0 1096 aaKnown RBP19.82■□□□□ 0.76
USH1C-202ENST00000318024 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
USH1C-202ENST00000318024 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
USH1C-202ENST00000318024 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
USH1C-202ENST00000318024 MEGF6O75095 1541 aa19.81■□□□□ 0.76
USH1C-202ENST00000318024 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
USH1C-202ENST00000318024 UBAP1LF5GYI3 381 aa19.8■□□□□ 0.76
USH1C-202ENST00000318024 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
USH1C-202ENST00000318024 TEFQ10587 303 aa19.8■□□□□ 0.76
USH1C-202ENST00000318024 IPO8O15397 1037 aaKnown RBP19.8■□□□□ 0.76
USH1C-202ENST00000318024 NECTIN2Q92692 538 aa19.8■□□□□ 0.76
USH1C-202ENST00000318024 BTG4Q9NY30 223 aa19.8■□□□□ 0.76
USH1C-202ENST00000318024 MRE11P49959 708 aa19.79■□□□□ 0.76
USH1C-202ENST00000318024 MFAP1P55081 439 aaKnown RBP19.79■□□□□ 0.76
USH1C-202ENST00000318024 KCNQ3O43525 872 aa19.79■□□□□ 0.76
USH1C-202ENST00000318024 RBM25P49756 843 aaKnown RBP19.79■□□□□ 0.76
USH1C-202ENST00000318024 ITPRIPQ8IWB1 547 aa19.79■□□□□ 0.76
USH1C-202ENST00000318024 COL5A2P05997 1499 aaPredicted RBP19.78■□□□□ 0.76
USH1C-202ENST00000318024 TMEM57Q8N5G2 664 aa19.78■□□□□ 0.76
USH1C-202ENST00000318024 GZF1Q9H116 711 aaPredicted RBP19.78■□□□□ 0.76
USH1C-202ENST00000318024 SPG7Q9UQ90 795 aa19.78■□□□□ 0.76
USH1C-202ENST00000318024 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
USH1C-202ENST00000318024 SNX21Q969T3 373 aa19.78■□□□□ 0.76
USH1C-202ENST00000318024 BTBD11A6QL63 1104 aa19.77■□□□□ 0.76
USH1C-202ENST00000318024 ADAMTS2O95450 1211 aa19.77■□□□□ 0.76
USH1C-202ENST00000318024 BRPF1P55201 1214 aaPredicted RBP19.77■□□□□ 0.76
USH1C-202ENST00000318024 ISY1Q9ULR0 285 aaKnown RBP19.77■□□□□ 0.76
USH1C-202ENST00000318024 PHKG2P15735 406 aa19.76■□□□□ 0.75
USH1C-202ENST00000318024 CYP27B1O15528 508 aa19.76■□□□□ 0.75
USH1C-202ENST00000318024 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
USH1C-202ENST00000318024 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
USH1C-202ENST00000318024 FAM208AQ9UK61 1670 aaKnown RBP19.76■□□□□ 0.75
USH1C-202ENST00000318024 ABCA3Q99758 1704 aa19.75■□□□□ 0.75
USH1C-202ENST00000318024 NUTM2BA6NNL0 878 aaPredicted RBP19.75■□□□□ 0.75
USH1C-202ENST00000318024 DDX11L8A8MPP1 907 aa19.75■□□□□ 0.75
USH1C-202ENST00000318024 NUTM2EB1AL46 878 aaPredicted RBP19.75■□□□□ 0.75
USH1C-202ENST00000318024 NUTM2AQ8IVF1 878 aaPredicted RBP19.75■□□□□ 0.75
USH1C-202ENST00000318024 ABCC6O95255 1503 aa19.75■□□□□ 0.75
USH1C-202ENST00000318024 AHDC1Q5TGY3 1603 aaPredicted RBP19.75■□□□□ 0.75
USH1C-202ENST00000318024 ZBTB40Q9NUA8 1239 aa19.75■□□□□ 0.75
USH1C-202ENST00000318024 LRRC37A3O60309 1634 aa19.74■□□□□ 0.75
USH1C-202ENST00000318024 IFNL2Q8IZJ0 200 aa19.74■□□□□ 0.75
USH1C-202ENST00000318024 GRPEL1Q9HAV7 217 aa19.74■□□□□ 0.75
USH1C-202ENST00000318024 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
USH1C-202ENST00000318024 HSCBQ8IWL3 235 aa19.73■□□□□ 0.75
USH1C-202ENST00000318024 BABAM1Q9NWV8 329 aa19.73■□□□□ 0.75
USH1C-202ENST00000318024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.73■□□□□ 0.75
USH1C-202ENST00000318024 ARXQ96QS3 562 aa19.72■□□□□ 0.75
USH1C-202ENST00000318024 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
USH1C-202ENST00000318024 NFATC2IPQ8NCF5 419 aa19.72■□□□□ 0.75
USH1C-202ENST00000318024 IL2RBP14784 551 aa19.71■□□□□ 0.75
USH1C-202ENST00000318024 EIF2S2P20042 333 aaKnown RBP19.71■□□□□ 0.75
USH1C-202ENST00000318024 NUCB1Q02818 461 aa19.71■□□□□ 0.75
USH1C-202ENST00000318024 G2E3Q7L622 706 aa19.71■□□□□ 0.75
USH1C-202ENST00000318024 ARHGAP45Q92619 1136 aa19.71■□□□□ 0.75
USH1C-202ENST00000318024 ZCRB1Q8TBF4 217 aaKnown RBP19.71■□□□□ 0.75
USH1C-202ENST00000318024 DDX54Q8TDD1 881 aaKnown RBP19.71■□□□□ 0.75
USH1C-202ENST00000318024 KIF2CQ99661 725 aa19.71■□□□□ 0.75
USH1C-202ENST00000318024 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
USH1C-202ENST00000318024 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
USH1C-202ENST00000318024 ERBB4Q15303 1308 aa19.7■□□□□ 0.74
USH1C-202ENST00000318024 KDM6AO15550 1401 aaPredicted RBP19.69■□□□□ 0.74
USH1C-202ENST00000318024 PHLPP1O60346 1717 aa19.69■□□□□ 0.74
USH1C-202ENST00000318024 TNPO1Q92973 898 aaKnown RBP19.69■□□□□ 0.74
USH1C-202ENST00000318024 RAB3GAP1Q15042 981 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 STK31Q9BXU1 1019 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 SLC52A2Q9HAB3 445 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 HDGFL1Q5TGJ6 251 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 CCDC30Q5VVM6 783 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 GAS2L3Q86XJ1 694 aa19.68■□□□□ 0.74
USH1C-202ENST00000318024 API5Q9BZZ5 524 aaKnown RBP19.68■□□□□ 0.74
USH1C-202ENST00000318024 PRAMEF22A3QJZ6 481 aa19.67■□□□□ 0.74
USH1C-202ENST00000318024 DCAF5Q96JK2 942 aa19.67■□□□□ 0.74
USH1C-202ENST00000318024 COL16A1Q07092 1604 aaPredicted RBP19.67■□□□□ 0.74
USH1C-202ENST00000318024 ABCC4O15439 1325 aa19.66■□□□□ 0.74
USH1C-202ENST00000318024 ESPNB1AK53 854 aa19.66■□□□□ 0.74
USH1C-202ENST00000318024 F6X3S4 739 aa19.66■□□□□ 0.74
USH1C-202ENST00000318024 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms