RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 NPM1P06748 294 aaKnown RBP eCLIP4.42□□□□□ -1.7
GEN1-201ENST00000317402 RIPK4P57078 832 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 FAM161AQ3B820 660 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 IPO4Q8TEX9 1081 aaKnown RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 ZFP91Q96JP5 570 aaPredicted RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 RBSNQ9H1K0 784 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 SDK1Q7Z5N4 2213 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 AHCTF1Q8WYP5 2266 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 GOLGA8FQ08AF8 430 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 GOLGA8DPQ0D2H9 430 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 SMC4Q9NTJ3 1288 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 NSD3Q9BZ95 1437 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 DYSFO75923 2080 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 AFDNP55196 1824 aaKnown RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 SPDYE4A6NLX3 237 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 NLRP13Q86W25 1043 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 NLRP1Q9C000 1473 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 TNPO1Q92973 898 aaKnown RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 SMIM22K7EJ46 135 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 CLGNO14967 610 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 COBLO75128 1261 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 NOM1Q5C9Z4 860 aaKnown RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 FAM182BQ5T319 152 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 EFCAB2Q5VUJ9 269 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 GPRASP1Q5JY77 1395 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 NEFHP12036 1026 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 MCTP1Q6DN14 999 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 PRAG1Q86YV5 1406 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 UPF3BQ9BZI7 483 aaKnown RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 TRIP12Q14669 1992 aaPredicted RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 PRKAR2BP31323 418 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 HSP90AB2PQ58FF8 381 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 AXDND1Q5T1B0 1012 aaPredicted RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 PCNX1Q96RV3 2341 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 CLASP1Q7Z460 1538 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 DOCK6Q96HP0 2047 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 NEO1Q92859 1461 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 PHAXQ9H814 394 aaKnown RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 DENND2AQ9ULE3 1009 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 E9PCH4 1651 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 UBE2Q2LH0YL09 131 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 MEIS3Q99687 375 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 EXOC6BQ9Y2D4 811 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 TRERF1Q96PN7 1200 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 ST7Q9NRC1 585 aa4.41□□□□□ -1.7
GEN1-201ENST00000317402 PA2G4Q9UQ80 394 aaKnown RBP4.41□□□□□ -1.7
GEN1-201ENST00000317402 ARID5BQ14865 1188 aa4.4□□□□□ -1.7
GEN1-201ENST00000317402 NOTCH3Q9UM47 2321 aa4.4□□□□□ -1.7
GEN1-201ENST00000317402 NINLQ9Y2I6 1382 aa4.4□□□□□ -1.7
GEN1-201ENST00000317402 AIMP1Q12904 312 aaKnown RBP4.4□□□□□ -1.7
GEN1-201ENST00000317402 USP32Q8NFA0 1604 aa4.4□□□□□ -1.7
GEN1-201ENST00000317402 TNNT1P13805 278 aa4.4□□□□□ -1.7
GEN1-201ENST00000317402 HMGB2P26583 209 aaKnown RBP4.4□□□□□ -1.7
GEN1-201ENST00000317402 FTOQ9C0B1 505 aaKnown RBP eCLIP4.4□□□□□ -1.7
GEN1-201ENST00000317402 MDC1Q14676 2089 aaKnown RBP4.4□□□□□ -1.7
GEN1-201ENST00000317402 PLCB2Q00722 1185 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 CCDC24Q8N4L8 307 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 CHRNA2Q15822 529 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 BCCIPQ9P287 314 aaKnown RBP eCLIP4.4□□□□□ -1.71
GEN1-201ENST00000317402 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.4□□□□□ -1.71
GEN1-201ENST00000317402 ZDHHC9Q9Y397 364 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 V9GYY5 206 aaPredicted RBP4.4□□□□□ -1.71
GEN1-201ENST00000317402 LRRC2Q9BYS8 371 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 INO80Q9ULG1 1556 aaPredicted RBP4.4□□□□□ -1.71
GEN1-201ENST00000317402 WTIPA6NIX2 430 aaPredicted RBP4.4□□□□□ -1.71
GEN1-201ENST00000317402 VGLL3A8MV65 326 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 ZC3H6P61129 1189 aaKnown RBP4.4□□□□□ -1.71
GEN1-201ENST00000317402 LAMA3Q16787 3333 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 GJB4Q9NTQ9 266 aa4.4□□□□□ -1.71
GEN1-201ENST00000317402 LMTK2Q8IWU2 1503 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 CENPJQ9HC77 1338 aaPredicted RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 SETBP1Q9Y6X0 1596 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 REREQ9P2R6 1566 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 R3HCC1Q9Y3T6 440 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 NBPF7P0C2Y1 421 aaPredicted RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 SLC4A8Q2Y0W8 1093 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 GPT2Q8TD30 523 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 CGNQ9P2M7 1197 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 NECAB1Q8N987 351 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 PLEKHF1Q96S99 279 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 TTC37Q6PGP7 1564 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 SAMD9LQ8IVG5 1584 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 SEC62Q99442 399 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 HINFPQ9BQA5 517 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 MYO3AQ8NEV4 1616 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 RBM25P49756 843 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 SLC39A6Q13433 755 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 TLR7Q9NYK1 1049 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 MED13LQ71F56 2210 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 FYB1O15117 783 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 TRAK2O60296 914 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 TRMT2AQ8IZ69 625 aaKnown RBP4.39□□□□□ -1.71
GEN1-201ENST00000317402 GPATCH11Q8N954 259 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 TRPM2O94759 1503 aa4.39□□□□□ -1.71
GEN1-201ENST00000317402 COL17A1Q9UMD9 1497 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms