RNA–Protein interactions for RNA: ENST00000317357.9

SOBP-201, Transcript of sine oculis binding protein homolog, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SOBP, Length 5,245 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-201ENST00000317357 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
SOBP-201ENST00000317357 CDK19Q9BWU1 502 aa23.25■■□□□ 1.31
SOBP-201ENST00000317357 RAI14Q9P0K7 980 aa23.25■■□□□ 1.31
SOBP-201ENST00000317357 KLHL10Q6JEL2 608 aa23.25■■□□□ 1.31
SOBP-201ENST00000317357 GIMAP7Q8NHV1 300 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 CCDC113Q9H0I3 377 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 MAP2K1Q02750 393 aaPredicted RBP23.24■■□□□ 1.31
SOBP-201ENST00000317357 MAP9Q49MG5 647 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 RPGRIP1LQ68CZ1 1315 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 DDX54Q8TDD1 881 aaKnown RBP23.24■■□□□ 1.31
SOBP-201ENST00000317357 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 EFCAB5A4FU69 1503 aa23.24■■□□□ 1.31
SOBP-201ENST00000317357 LRP2BPQ9P2M1 347 aa23.23■■□□□ 1.31
SOBP-201ENST00000317357 PRPF40BQ6NWY9 871 aaKnown RBP23.23■■□□□ 1.31
SOBP-201ENST00000317357 TOP1P11387 765 aaKnown RBP23.23■■□□□ 1.31
SOBP-201ENST00000317357 GOLGA6L10A0A0M3HER8 536 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 ZNF76P36508 570 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 MX1P20591 662 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 AIDAQ96BJ3 306 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 CLIP2Q9UDT6 1046 aa23.22■■□□□ 1.31
SOBP-201ENST00000317357 IBSPP21815 317 aaPredicted RBP23.21■■□□□ 1.31
SOBP-201ENST00000317357 CASQ1P31415 396 aa23.21■■□□□ 1.31
SOBP-201ENST00000317357 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
SOBP-201ENST00000317357 USP25Q9UHP3 1055 aa23.21■■□□□ 1.31
SOBP-201ENST00000317357 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
SOBP-201ENST00000317357 GLRX3O76003 335 aaKnown RBP23.21■■□□□ 1.31
SOBP-201ENST00000317357 USP5P45974 858 aa23.21■■□□□ 1.31
SOBP-201ENST00000317357 SLC26A8Q96RN1 970 aa23.21■■□□□ 1.31
SOBP-201ENST00000317357 CETN2P41208 172 aa23.2■■□□□ 1.31
SOBP-201ENST00000317357 KIF1BPQ96EK5 621 aa23.2■■□□□ 1.31
SOBP-201ENST00000317357 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.31
SOBP-201ENST00000317357 ZNF287Q9HBT7 754 aa23.2■■□□□ 1.3
SOBP-201ENST00000317357 FCHSD2O94868 740 aa23.2■■□□□ 1.3
SOBP-201ENST00000317357 TNNT1P13805 278 aa23.2■■□□□ 1.3
SOBP-201ENST00000317357 POLR3GO15318 223 aaPredicted RBP23.2■■□□□ 1.3
SOBP-201ENST00000317357 RBM5P52756 815 aaKnown RBP eCLIP23.2■■□□□ 1.3
SOBP-201ENST00000317357 LUZP1Q86V48 1076 aa23.2■■□□□ 1.3
SOBP-201ENST00000317357 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
SOBP-201ENST00000317357 CCDC85AQ96PX6 553 aaPredicted RBP23.19■■□□□ 1.3
SOBP-201ENST00000317357 ZSCAN29Q8IWY8 852 aaPredicted RBP23.19■■□□□ 1.3
SOBP-201ENST00000317357 FKBP15Q5T1M5 1219 aa23.19■■□□□ 1.3
SOBP-201ENST00000317357 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 TRMT1Q9NXH9 659 aaKnown RBP23.18■■□□□ 1.3
SOBP-201ENST00000317357 CACNA2D4Q7Z3S7 1137 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 CCDC91Q7Z6B0 441 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 C16orf45Q96MC5 204 aaPredicted RBP23.18■■□□□ 1.3
SOBP-201ENST00000317357 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 RAPGEF3O95398 923 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 SSFA2P28290 1259 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
SOBP-201ENST00000317357 CGNQ9P2M7 1197 aaKnown RBP23.18■■□□□ 1.3
SOBP-201ENST00000317357 NEBLO76041 1014 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
SOBP-201ENST00000317357 CKAP2LQ8IYA6 745 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 SMARCA5O60264 1052 aaPredicted RBP23.17■■□□□ 1.3
SOBP-201ENST00000317357 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
SOBP-201ENST00000317357 MATR3P43243 847 aaKnown RBP eCLIP23.17■■□□□ 1.34e-7■□□□□ 10.6
SOBP-201ENST00000317357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.17■■□□□ 1.34e-8■■■■■ 38.6
SOBP-201ENST00000317357 TRIM21P19474 475 aaKnown RBP23.17■■□□□ 1.3
SOBP-201ENST00000317357 MCM3P25205 808 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 SH2B1Q9NRF2 756 aaPredicted RBP23.17■■□□□ 1.3
SOBP-201ENST00000317357 RTEL1-TNFRSF6BF6WH68 1400 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 NFE2L2Q16236 605 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 ABCF2Q9UG63 623 aa23.17■■□□□ 1.3
SOBP-201ENST00000317357 IFFO1Q0D2I5 559 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 TRERF1Q96PN7 1200 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 TMOD2Q9NZR1 351 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 DNAI2Q9GZS0 605 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 CALCOCO1Q9P1Z2 691 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 KIAA0586Q9BVV6 1533 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 POTEJP0CG39 1038 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 C8orf76Q96K31 380 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 PAFAH1B1P43034 410 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 DNA2P51530 1060 aa23.16■■□□□ 1.3
SOBP-201ENST00000317357 IGHMBP2P38935 993 aaKnown RBP23.16■■□□□ 1.3
SOBP-201ENST00000317357 TROQ12816 1431 aaPredicted RBP23.15■■□□□ 1.3
SOBP-201ENST00000317357 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
SOBP-201ENST00000317357 GSTTP1A0A1W2PQM5 241 aa23.15■■□□□ 1.3
SOBP-201ENST00000317357 RAB11FIP3O75154 756 aa23.15■■□□□ 1.3
SOBP-201ENST00000317357 SKAP1Q86WV1 359 aa23.15■■□□□ 1.3
SOBP-201ENST00000317357 TNPO1Q92973 898 aaKnown RBP23.15■■□□□ 1.3
SOBP-201ENST00000317357 GUCY1B3Q02153 619 aa23.15■■□□□ 1.3
SOBP-201ENST00000317357 CPLX3Q8WVH0 158 aa23.14■■□□□ 1.3
SOBP-201ENST00000317357 VPS36Q86VN1 386 aa23.14■■□□□ 1.29
SOBP-201ENST00000317357 BOLA2Q9H3K6 86 aa23.14■■□□□ 1.29
SOBP-201ENST00000317357 TBC1D2Q9BYX2 928 aa23.13■■□□□ 1.29
SOBP-201ENST00000317357 CTAGE5O15320 804 aa23.13■■□□□ 1.29
SOBP-201ENST00000317357 ERBINQ96RT1 1412 aa23.13■■□□□ 1.29
SOBP-201ENST00000317357 MPHOSPH10O00566 681 aaKnown RBP23.13■■□□□ 1.29
SOBP-201ENST00000317357 CCDC178Q5BJE1 867 aa23.13■■□□□ 1.29
SOBP-201ENST00000317357 RNF187Q5TA31 235 aaPredicted RBP23.13■■□□□ 1.29
SOBP-201ENST00000317357 STARD3NLO95772 234 aa23.13■■□□□ 1.29
SOBP-201ENST00000317357 SPECC1Q5M775 1068 aa23.12■■□□□ 1.29
SOBP-201ENST00000317357 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
SOBP-201ENST00000317357 THUMPD2Q9BTF0 503 aaKnown RBP23.12■■□□□ 1.29
SOBP-201ENST00000317357 NUP88Q99567 741 aaPredicted RBP23.12■■□□□ 1.29
SOBP-201ENST00000317357 GTF2F1P35269 517 aaKnown RBP eCLIP23.12■■□□□ 1.29
SOBP-201ENST00000317357 AKAP2Q9Y2D5 859 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms