RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PPP1R9BQ96SB3 815 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 MYCBPQ99417 103 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 LRRCC1Q9C099 1032 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 LNPKQ9C0E8 428 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 SSH2Q76I76 1423 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 SLFN5Q08AF3 891 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 CNTROBQ8N137 903 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 PIBF1Q8WXW3 757 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 NUP62CLQ9H1M0 184 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 ARFGAP3Q9NP61 516 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 GRIN2BQ13224 1484 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 RAD54L2Q9Y4B4 1467 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 EFCAB2Q5VUJ9 269 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 IPO4Q8TEX9 1081 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF592Q92610 1267 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 PUS7Q96PZ0 661 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 TNMDQ9H2S6 317 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 CDKL5O76039 1030 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 GTF2A1P52655 376 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 FAM200AQ8TCP9 573 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 PAIP2Q9BPZ3 127 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 RAPGEF6Q8TEU7 1601 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 SCAF11Q99590 1463 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 SOS1Q07889 1333 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 EZRP15311 586 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 IMMTQ16891 758 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 CRACR2AQ9BSW2 395 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 ANKRD36BQ8N2N9 1353 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 SHROOM2Q13796 1616 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 COL17A1Q9UMD9 1497 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 B4GALNT4Q76KP1 1039 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 TNPO1Q92973 898 aaKnown RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 KDM6BO15054 1643 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 TP53BP1Q12888 1972 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-201ENST00000317147 CDC42BPAQ5VT25 1732 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC30Q5VVM6 783 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 SYNE3Q6ZMZ3 975 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 DYDC1Q8WWB3 177 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 ANO10Q9NW15 660 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 RAD50Q92878 1312 aa5.28□□□□□ -1.56
CNOT1-201ENST00000317147 HNRNPMP52272 730 aaKnown RBP eCLIP5.27□□□□□ -1.574e-6■■□□□ 11.9
CNOT1-201ENST00000317147 TRIM29Q14134 588 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 SAFB2Q14151 953 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 SLMAPQ14BN4 828 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 SAFBQ15424 915 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CHD1LQ86WJ1 897 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CHMP3Q9Y3E7 222 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 ARHGAP25P42331 645 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CEP120Q8N960 986 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 HEATR1Q9H583 2144 aaKnown RBP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 RPGRIP1LQ68CZ1 1315 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 STX1AQ16623 288 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CCDC148Q8NFR7 591 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 ADGRL2O95490 1459 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 IFT140Q96RY7 1462 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CDK13Q14004 1512 aaKnown RBP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 NF2P35240 595 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 FMNL3Q8IVF7 1028 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 XBP1P17861 261 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CEP112Q8N8E3 955 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 RNF214Q8ND24 703 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 ERO1AQ96HE7 468 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 RPGRIP1Q96KN7 1286 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 MPNDQ8N594 471 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 PBRM1Q86U86 1689 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.572e-6■■■□□ 15.5
CNOT1-201ENST00000317147 SLFNL1Q499Z3 407 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 MIPOL1Q8TD10 442 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 CEP89Q96ST8 783 aa5.27□□□□□ -1.57
CNOT1-201ENST00000317147 RRAGDQ9NQL2 400 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-201ENST00000317147 ARHGAP31Q2M1Z3 1444 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 PIP4K2BP78356 416 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 NOL8Q76FK4 1167 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 SWAP70Q9UH65 585 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 PPP2R1AP30153 589 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 SH2D4BQ5SQS7 431 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 GIGYF2Q6Y7W6 1299 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 PAXIP1Q6ZW49 1069 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 PDZRN3Q9UPQ7 1066 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 KIF5CO60282 957 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 NBPF7P0C2Y1 421 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 CKAP4Q07065 602 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 CPSF2Q9P2I0 782 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 TULP1O00294 542 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 ERCC3P19447 782 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 SDF4Q9BRK5 362 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 ZSCAN16Q9H4T2 348 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 SLU7O95391 586 aaKnown RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 SEC24BO95487 1268 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.576e-8■■■■□ 19.3
CNOT1-201ENST00000317147 TTC31Q49AM3 519 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-201ENST00000317147 IQCDQ96DY2 449 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 PTPRKQ15262 1439 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 STIM1Q13586 685 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 CROCCP2Q86T23 111 aa5.26□□□□□ -1.57
CNOT1-201ENST00000317147 IMPACTQ9P2X3 320 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms