RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-202ENST00000317118 EXOC5O00471 708 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 CYP27B1O15528 508 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 GNAI1P63096 354 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 PLCB2Q00722 1185 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 IL17REQ8NFR9 667 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 DCAF5Q96JK2 942 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 MYH16Q9H6N6 1097 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 MRC1P22897 1456 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 USP35Q9P2H5 1018 aa7.69□□□□□ -1.18
PDE4D-202ENST00000317118 RNMTO43148 476 aaKnown RBP7.68□□□□□ -1.18
PDE4D-202ENST00000317118 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
PDE4D-202ENST00000317118 QTRT2Q9H974 415 aaKnown RBP7.68□□□□□ -1.18
PDE4D-202ENST00000317118 CCDC9Q9Y3X0 531 aaKnown RBP7.68□□□□□ -1.18
PDE4D-202ENST00000317118 CHL1O00533 1208 aa7.68□□□□□ -1.18
PDE4D-202ENST00000317118 DDB1Q16531 1140 aa7.68□□□□□ -1.18
PDE4D-202ENST00000317118 SCN11AQ9UI33 1791 aa7.68□□□□□ -1.18
PDE4D-202ENST00000317118 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
PDE4D-202ENST00000317118 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 MCM10Q7L590 875 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 CDCA7LQ96GN5 454 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 BCL9O00512 1426 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 CT47B1P0C2W7 299 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-202ENST00000317118 DCTN1Q14203 1278 aa7.67□□□□□ -1.18
PDE4D-202ENST00000317118 TAF7Q15545 349 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-202ENST00000317118 SIPA1L3O60292 1781 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-202ENST00000317118 RBM6P78332 1123 aaKnown RBP7.66□□□□□ -1.18
PDE4D-202ENST00000317118 FAM98CQ17RN3 349 aaKnown RBP7.66□□□□□ -1.18
PDE4D-202ENST00000317118 MPRIPQ6WCQ1 1025 aa7.66□□□□□ -1.18
PDE4D-202ENST00000317118 LGR6Q9HBX8 967 aa7.66□□□□□ -1.18
PDE4D-202ENST00000317118 TEFQ10587 303 aa7.66□□□□□ -1.18
PDE4D-202ENST00000317118 SLC52A2Q9HAB3 445 aa7.66□□□□□ -1.18
PDE4D-202ENST00000317118 SOS1Q07889 1333 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-202ENST00000317118 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
PDE4D-202ENST00000317118 AKT1S1Q96B36 256 aa7.65□□□□□ -1.18
PDE4D-202ENST00000317118 THUMPD2Q9BTF0 503 aaKnown RBP7.65□□□□□ -1.18
PDE4D-202ENST00000317118 KDM3BQ7LBC6 1761 aa7.65□□□□□ -1.18
PDE4D-202ENST00000317118 DDX54Q8TDD1 881 aaKnown RBP7.65□□□□□ -1.18
PDE4D-202ENST00000317118 MBIPQ9NS73 344 aa7.65□□□□□ -1.18
PDE4D-202ENST00000317118 VIRMAQ69YN4 1812 aaKnown RBP7.65□□□□□ -1.19
PDE4D-202ENST00000317118 MARCH10Q8NA82 808 aaPredicted RBP7.65□□□□□ -1.19
PDE4D-202ENST00000317118 ZNF428Q96B54 188 aa7.65□□□□□ -1.19
PDE4D-202ENST00000317118 TOGARAM1Q9Y4F4 1720 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 RGS17Q9UGC6 210 aaPredicted RBP7.64□□□□□ -1.19
PDE4D-202ENST00000317118 PAPPAQ13219 1627 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 POTEMA6NI47 508 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 CABP4P57796 275 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 ILDR1Q86SU0 546 aaPredicted RBP7.64□□□□□ -1.19
PDE4D-202ENST00000317118 SEPT12Q8IYM1 358 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 TSPYL4Q9UJ04 414 aa7.64□□□□□ -1.19
PDE4D-202ENST00000317118 HEG1Q9ULI3 1381 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 HOXB7P09629 217 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 RXRBP28702 533 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 TSR2Q969E8 191 aaKnown RBP7.63□□□□□ -1.19
PDE4D-202ENST00000317118 EXOSC9Q06265 439 aaKnown RBP7.63□□□□□ -1.19
PDE4D-202ENST00000317118 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 CHMP4AQ9BY43 222 aa7.63□□□□□ -1.19
PDE4D-202ENST00000317118 LAS1LQ9Y4W2 734 aaKnown RBP7.63□□□□□ -1.19
PDE4D-202ENST00000317118 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
PDE4D-202ENST00000317118 U3KPZ7 1027 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-202ENST00000317118 DOT1LQ8TEK3 1739 aa7.62□□□□□ -1.19
PDE4D-202ENST00000317118 EIF4A1P60842 406 aaKnown RBP7.62□□□□□ -1.19
PDE4D-202ENST00000317118 ZNF790Q6PG37 636 aa7.62□□□□□ -1.19
PDE4D-202ENST00000317118 PPP4R3CPQ6ZMV5 832 aa7.62□□□□□ -1.19
PDE4D-202ENST00000317118 TMOD3Q9NYL9 352 aa7.62□□□□□ -1.19
PDE4D-202ENST00000317118 UBR2Q8IWV8 1755 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 VAMP4O75379 141 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 BRPF1P55201 1214 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-202ENST00000317118 ALDH1L2Q3SY69 923 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 NHSQ6T4R5 1651 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 RNF123Q5XPI4 1314 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 TWISTNBQ3B726 338 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-202ENST00000317118 POTEAQ6S8J7 498 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 KRT27Q7Z3Y8 459 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 PIGBQ92521 554 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 MIS18AQ9NYP9 233 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 RCAN3Q9UKA8 241 aa7.61□□□□□ -1.19
PDE4D-202ENST00000317118 ITGB4P16144 1822 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 KCPQ6ZWJ8 1503 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 A0A0G2JS52 829 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 TTC5Q8N0Z6 440 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 VSIG10Q8N0Z9 540 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 C8orf58Q8NAV2 365 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 RGS12O14924 1447 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 FXR2P51116 673 aaKnown RBP eCLIP7.6□□□□□ -1.19
PDE4D-202ENST00000317118 RARSP54136 660 aaKnown RBP7.6□□□□□ -1.19
PDE4D-202ENST00000317118 FAM196AQ6ZSG2 479 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
PDE4D-202ENST00000317118 CICQ96RK0 1608 aaPredicted RBP7.6□□□□□ -1.19
PDE4D-202ENST00000317118 ZNF831Q5JPB2 1677 aa7.59□□□□□ -1.19
PDE4D-202ENST00000317118 PRIM1P49642 420 aaKnown RBP7.59□□□□□ -1.19
PDE4D-202ENST00000317118 BRWD3Q6RI45 1802 aa7.59□□□□□ -1.2
PDE4D-202ENST00000317118 KCNQ3O43525 872 aa7.59□□□□□ -1.2
PDE4D-202ENST00000317118 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.2
PDE4D-202ENST00000317118 TSPYL6Q8N831 410 aa7.59□□□□□ -1.2
PDE4D-202ENST00000317118 SMARCC1Q92922 1105 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms