RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 SPON1Q9HCB6 807 aa24.23■■□□□ 1.47
KLHDC4-202ENST00000316853 RNMTO43148 476 aaKnown RBP24.22■■□□□ 1.47
KLHDC4-202ENST00000316853 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
KLHDC4-202ENST00000316853 ZNF316A6NFI3 1004 aaPredicted RBP24.21■■□□□ 1.47
KLHDC4-202ENST00000316853 FCHSD2O94868 740 aa24.21■■□□□ 1.47
KLHDC4-202ENST00000316853 RBM42Q9BTD8 480 aaKnown RBP24.21■■□□□ 1.47
KLHDC4-202ENST00000316853 ATF5Q9Y2D1 282 aaPredicted RBP24.21■■□□□ 1.47
KLHDC4-202ENST00000316853 ATP6V1AP38606 617 aa24.2■■□□□ 1.46
KLHDC4-202ENST00000316853 SLC52A2Q9HAB3 445 aa24.2■■□□□ 1.46
KLHDC4-202ENST00000316853 C4BP0C0L5 1744 aa24.2■■□□□ 1.46
KLHDC4-202ENST00000316853 PNPLA7Q6ZV29 1317 aa24.19■■□□□ 1.46
KLHDC4-202ENST00000316853 MYBBP1AQ9BQG0 1328 aaKnown RBP24.19■■□□□ 1.46
KLHDC4-202ENST00000316853 GNAT3A8MTJ3 354 aa24.19■■□□□ 1.46
KLHDC4-202ENST00000316853 MAP3K5Q99683 1374 aa24.18■■□□□ 1.46
KLHDC4-202ENST00000316853 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
KLHDC4-202ENST00000316853 HMGB2P26583 209 aaKnown RBP24.18■■□□□ 1.46
KLHDC4-202ENST00000316853 MSH5O43196 834 aa24.17■■□□□ 1.46
KLHDC4-202ENST00000316853 PTCD1O75127 700 aaKnown RBP24.17■■□□□ 1.46
KLHDC4-202ENST00000316853 ITPK1Q13572 414 aa24.17■■□□□ 1.46
KLHDC4-202ENST00000316853 LINC00116Q8NCU8 138 aa24.16■■□□□ 1.46
KLHDC4-202ENST00000316853 AK7Q96M32 723 aa24.16■■□□□ 1.46
KLHDC4-202ENST00000316853 PPP1R1BQ9UD71 204 aaPredicted RBP24.16■■□□□ 1.46
KLHDC4-202ENST00000316853 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
KLHDC4-202ENST00000316853 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
KLHDC4-202ENST00000316853 UBR3Q6ZT12 1888 aa24.15■■□□□ 1.46
KLHDC4-202ENST00000316853 MRC1P22897 1456 aa24.14■■□□□ 1.46
KLHDC4-202ENST00000316853 IL17REQ8NFR9 667 aa24.14■■□□□ 1.45
KLHDC4-202ENST00000316853 SLC4A9Q96Q91 983 aa24.14■■□□□ 1.45
KLHDC4-202ENST00000316853 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
KLHDC4-202ENST00000316853 NEFMP07197 916 aa24.13■■□□□ 1.45
KLHDC4-202ENST00000316853 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
KLHDC4-202ENST00000316853 COL23A1Q86Y22 540 aaPredicted RBP24.13■■□□□ 1.45
KLHDC4-202ENST00000316853 DLG5Q8TDM6 1919 aa24.13■■□□□ 1.45
KLHDC4-202ENST00000316853 TEFQ10587 303 aa24.12■■□□□ 1.45
KLHDC4-202ENST00000316853 COL5A3P25940 1745 aaPredicted RBP24.12■■□□□ 1.45
KLHDC4-202ENST00000316853 PHF14O94880 888 aa24.11■■□□□ 1.45
KLHDC4-202ENST00000316853 SMIM5Q71RC9 77 aa24.11■■□□□ 1.45
KLHDC4-202ENST00000316853 SIPA1L3O60292 1781 aaPredicted RBP24.11■■□□□ 1.45
KLHDC4-202ENST00000316853 PTGER2P43116 358 aa24.1■■□□□ 1.45
KLHDC4-202ENST00000316853 SLC16A10Q8TF71 515 aa24.1■■□□□ 1.45
KLHDC4-202ENST00000316853 AMIGO3Q86WK7 504 aa24.09■■□□□ 1.45
KLHDC4-202ENST00000316853 RTF1Q92541 710 aaKnown RBP24.09■■□□□ 1.45
KLHDC4-202ENST00000316853 GNPATO15228 680 aa24.08■■□□□ 1.45
KLHDC4-202ENST00000316853 FLAD1Q8NFF5 587 aa24.08■■□□□ 1.45
KLHDC4-202ENST00000316853 PLEKHF1Q96S99 279 aa24.08■■□□□ 1.45
KLHDC4-202ENST00000316853 PNNQ9H307 717 aaKnown RBP24.08■■□□□ 1.45
KLHDC4-202ENST00000316853 MYH14Q7Z406 1995 aaKnown RBP24.08■■□□□ 1.45
KLHDC4-202ENST00000316853 TJP1Q07157 1748 aa24.07■■□□□ 1.44
KLHDC4-202ENST00000316853 MCM10Q7L590 875 aa24.07■■□□□ 1.44
KLHDC4-202ENST00000316853 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
KLHDC4-202ENST00000316853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.06■■□□□ 1.44
KLHDC4-202ENST00000316853 UBR2Q8IWV8 1755 aa24.06■■□□□ 1.44
KLHDC4-202ENST00000316853 CEMIPQ8WUJ3 1361 aa24.05■■□□□ 1.44
KLHDC4-202ENST00000316853 DCTN1Q14203 1278 aa24.05■■□□□ 1.44
KLHDC4-202ENST00000316853 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
KLHDC4-202ENST00000316853 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
KLHDC4-202ENST00000316853 SSFA2P28290 1259 aa24.04■■□□□ 1.44
KLHDC4-202ENST00000316853 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
KLHDC4-202ENST00000316853 MSL1Q68DK7 614 aa24.04■■□□□ 1.44
KLHDC4-202ENST00000316853 KCPQ6ZWJ8 1503 aa24.04■■□□□ 1.44
KLHDC4-202ENST00000316853 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
KLHDC4-202ENST00000316853 POLD1P28340 1107 aa24.03■■□□□ 1.44
KLHDC4-202ENST00000316853 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 RC3H1Q5TC82 1133 aaKnown RBP24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 ARXQ96QS3 562 aa24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 RTCBQ9Y3I0 505 aaKnown RBP24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 CNTNAP4Q9C0A0 1308 aa24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
KLHDC4-202ENST00000316853 BTBD11A6QL63 1104 aa24.01■■□□□ 1.43
KLHDC4-202ENST00000316853 CRKLP46109 303 aaKnown RBP24.01■■□□□ 1.43
KLHDC4-202ENST00000316853 NFE2L2Q16236 605 aa24.01■■□□□ 1.43
KLHDC4-202ENST00000316853 ZNF790Q6PG37 636 aa24.01■■□□□ 1.43
KLHDC4-202ENST00000316853 CCDC146Q8IYE0 955 aa24■■□□□ 1.43
KLHDC4-202ENST00000316853 TRAPPC3LQ5T215 181 aa23.99■■□□□ 1.43
KLHDC4-202ENST00000316853 RPS6KA4O75676 772 aa23.98■■□□□ 1.43
KLHDC4-202ENST00000316853 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
KLHDC4-202ENST00000316853 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
KLHDC4-202ENST00000316853 KCNQ3O43525 872 aa23.97■■□□□ 1.43
KLHDC4-202ENST00000316853 KLHL34Q8N239 644 aa23.97■■□□□ 1.43
KLHDC4-202ENST00000316853 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
KLHDC4-202ENST00000316853 CYP19A1P11511 503 aaPredicted RBP23.96■■□□□ 1.43
KLHDC4-202ENST00000316853 INTS5Q6P9B9 1019 aaKnown RBP23.96■■□□□ 1.43
KLHDC4-202ENST00000316853 VSIG10Q8N0Z9 540 aa23.96■■□□□ 1.43
KLHDC4-202ENST00000316853 ARHGEF1Q92888 912 aaKnown RBP23.96■■□□□ 1.43
KLHDC4-202ENST00000316853 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
KLHDC4-202ENST00000316853 ANP32CO43423 234 aa23.95■■□□□ 1.42
KLHDC4-202ENST00000316853 THUMPD2Q9BTF0 503 aaKnown RBP23.95■■□□□ 1.42
KLHDC4-202ENST00000316853 CCDC87Q9NVE4 849 aa23.95■■□□□ 1.42
KLHDC4-202ENST00000316853 HEG1Q9ULI3 1381 aa23.94■■□□□ 1.42
KLHDC4-202ENST00000316853 RFC4P35249 363 aa23.94■■□□□ 1.42
KLHDC4-202ENST00000316853 RIPK4P57078 832 aa23.94■■□□□ 1.42
KLHDC4-202ENST00000316853 TAF7Q15545 349 aaPredicted RBP23.94■■□□□ 1.42
KLHDC4-202ENST00000316853 FMNL2Q96PY5 1086 aa23.94■■□□□ 1.42
KLHDC4-202ENST00000316853 ADRA2BP18089 450 aa23.93■■□□□ 1.42
KLHDC4-202ENST00000316853 NEUROD2Q15784 382 aa23.93■■□□□ 1.42
KLHDC4-202ENST00000316853 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
KLHDC4-202ENST00000316853 SYT17Q9BSW7 474 aa23.93■■□□□ 1.42
KLHDC4-202ENST00000316853 MIS18AQ9NYP9 233 aa23.93■■□□□ 1.42
KLHDC4-202ENST00000316853 RRP7AQ9Y3A4 280 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms