RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 CWC15Q9P013 229 aaKnown RBP21.17■□□□□ 0.98
MINDY2-201ENST00000316848 CEP131Q9UPN4 1083 aa21.17■□□□□ 0.98
MINDY2-201ENST00000316848 ERLIN2O94905 339 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 PLB1Q6P1J6 1458 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 BICDL1Q6ZP65 573 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 SSBP05455 408 aaKnown RBP eCLIP21.16■□□□□ 0.98
MINDY2-201ENST00000316848 DDX11Q96FC9 970 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 HSP90AB3PQ58FF7 597 aa21.16■□□□□ 0.98
MINDY2-201ENST00000316848 SH2B1Q9NRF2 756 aaPredicted RBP21.16■□□□□ 0.98
MINDY2-201ENST00000316848 MAP3K1Q13233 1512 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 MAP3K11Q16584 847 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 BOLA2Q9H3K6 86 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 NSD2O96028 1365 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 CCDC196A0A1B0GTZ2 297 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 MYD88Q99836 296 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 CAVIN4Q5BKX8 364 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 PRPF40BQ6NWY9 871 aaKnown RBP21.15■□□□□ 0.98
MINDY2-201ENST00000316848 HYPKQ9NX55 129 aa21.15■□□□□ 0.98
MINDY2-201ENST00000316848 SCAND2PQ9GZW5 306 aaPredicted RBP21.14■□□□□ 0.98
MINDY2-201ENST00000316848 TMOD2Q9NZR1 351 aa21.14■□□□□ 0.98
MINDY2-201ENST00000316848 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
MINDY2-201ENST00000316848 FOXO3O43524 673 aa21.14■□□□□ 0.97
MINDY2-201ENST00000316848 PTPRCP08575 1304 aa21.14■□□□□ 0.97
MINDY2-201ENST00000316848 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
MINDY2-201ENST00000316848 HMGB1P09429 215 aaKnown RBP21.13■□□□□ 0.97
MINDY2-201ENST00000316848 TTC21BQ7Z4L5 1316 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 AXDND1Q5T1B0 1012 aaPredicted RBP21.13■□□□□ 0.97
MINDY2-201ENST00000316848 CCDC181Q5TID7 509 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
MINDY2-201ENST00000316848 FILIP1Q7Z7B0 1213 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 H0YHG0 523 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 FERMT3Q86UX7 667 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 CCDC83Q8IWF9 413 aa21.13■□□□□ 0.97
MINDY2-201ENST00000316848 NAPBQ9H115 298 aa21.12■□□□□ 0.97
MINDY2-201ENST00000316848 LRPPRCP42704 1394 aaKnown RBP21.12■□□□□ 0.97
MINDY2-201ENST00000316848 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
MINDY2-201ENST00000316848 F6X3S4 739 aa21.12■□□□□ 0.97
MINDY2-201ENST00000316848 MAP3K12Q12852 859 aa21.12■□□□□ 0.97
MINDY2-201ENST00000316848 C20orf194Q5TEA3 1177 aa21.12■□□□□ 0.97
MINDY2-201ENST00000316848 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
MINDY2-201ENST00000316848 ERLIN1O75477 346 aa21.11■□□□□ 0.97
MINDY2-201ENST00000316848 USHBP1Q8N6Y0 703 aa21.11■□□□□ 0.97
MINDY2-201ENST00000316848 KIF14Q15058 1648 aa21.11■□□□□ 0.97
MINDY2-201ENST00000316848 FLIIQ13045 1269 aa21.11■□□□□ 0.97
MINDY2-201ENST00000316848 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
MINDY2-201ENST00000316848 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
MINDY2-201ENST00000316848 MPNDQ8N594 471 aa21.1■□□□□ 0.97
MINDY2-201ENST00000316848 ZNF76P36508 570 aa21.1■□□□□ 0.97
MINDY2-201ENST00000316848 TRIM27P14373 513 aa21.1■□□□□ 0.97
MINDY2-201ENST00000316848 PAF1Q8N7H5 531 aa21.1■□□□□ 0.97
MINDY2-201ENST00000316848 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
MINDY2-201ENST00000316848 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
MINDY2-201ENST00000316848 CCDC66A2RUB6 948 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 ZPR1O75312 459 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 ESPNB1AK53 854 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 PIP4K2BP78356 416 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
MINDY2-201ENST00000316848 CCDC191Q8NCU4 936 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 GOLGA6L10A6NI86 522 aa21.09■□□□□ 0.97
MINDY2-201ENST00000316848 KRI1Q8N9T8 703 aaKnown RBP21.09■□□□□ 0.97
MINDY2-201ENST00000316848 CUL7Q14999 1698 aa21.08■□□□□ 0.97
MINDY2-201ENST00000316848 MINDY4BA8MYZ0 360 aa21.08■□□□□ 0.97
MINDY2-201ENST00000316848 A0A087WZG4 1122 aa21.08■□□□□ 0.97
MINDY2-201ENST00000316848 USP5P45974 858 aa21.08■□□□□ 0.97
MINDY2-201ENST00000316848 CTCFLQ8NI51 663 aaPredicted RBP21.08■□□□□ 0.96
MINDY2-201ENST00000316848 MKNK2Q9HBH9 465 aa21.08■□□□□ 0.96
MINDY2-201ENST00000316848 EIF5P55010 431 aaKnown RBP21.07■□□□□ 0.96
MINDY2-201ENST00000316848 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
MINDY2-201ENST00000316848 CCDC8Q9H0W5 538 aaPredicted RBP21.07■□□□□ 0.96
MINDY2-201ENST00000316848 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
MINDY2-201ENST00000316848 CFAP100Q494V2 611 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 FAM177A1Q8N128 213 aaPredicted RBP21.07■□□□□ 0.96
MINDY2-201ENST00000316848 LIMCH1Q9UPQ0 1083 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 IQCA1Q86XH1 822 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 LAMC3Q9Y6N6 1575 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 C8orf76Q96K31 380 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 ECHDC1Q9NTX5 307 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
MINDY2-201ENST00000316848 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
MINDY2-201ENST00000316848 LEKR1Q6ZMV7 388 aa21.06■□□□□ 0.96
MINDY2-201ENST00000316848 PIBF1Q8WXW3 757 aa21.06■□□□□ 0.96
MINDY2-201ENST00000316848 RNF41Q9H4P4 317 aaPredicted RBP21.06■□□□□ 0.96
MINDY2-201ENST00000316848 SYCE3A1L190 88 aa21.06■□□□□ 0.96
MINDY2-201ENST00000316848 IQCEQ6IPM2 695 aa21.06■□□□□ 0.96
MINDY2-201ENST00000316848 SEC63Q9UGP8 760 aaKnown RBP21.06■□□□□ 0.96
MINDY2-201ENST00000316848 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
MINDY2-201ENST00000316848 SLC5A1P13866 664 aa21.06■□□□□ 0.96
MINDY2-201ENST00000316848 IL16Q14005 1332 aa21.05■□□□□ 0.96
MINDY2-201ENST00000316848 ANKRD18BA2A2Z9 1011 aa21.05■□□□□ 0.96
MINDY2-201ENST00000316848 ZNF213O14771 459 aa21.05■□□□□ 0.96
MINDY2-201ENST00000316848 SKIDA1Q1XH10 827 aa21.05■□□□□ 0.96
MINDY2-201ENST00000316848 TEX13AQ9BXU3 409 aaPredicted RBP21.05■□□□□ 0.96
MINDY2-201ENST00000316848 ANO10Q9NW15 660 aa21.05■□□□□ 0.96
MINDY2-201ENST00000316848 EIF3JO75822 258 aaKnown RBP21.05■□□□□ 0.96
MINDY2-201ENST00000316848 ARHGAP29Q52LW3 1261 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms