RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
ABCD3-201ENST00000315713 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
ABCD3-201ENST00000315713 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
ABCD3-201ENST00000315713 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
ABCD3-201ENST00000315713 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
ABCD3-201ENST00000315713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
ABCD3-201ENST00000315713 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
ABCD3-201ENST00000315713 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
ABCD3-201ENST00000315713 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
ABCD3-201ENST00000315713 LOC102724428A0A0B4J2F2 783 aa16.44■□□□□ 0.22
ABCD3-201ENST00000315713 SIK1P57059 783 aa16.44■□□□□ 0.22
ABCD3-201ENST00000315713 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
ABCD3-201ENST00000315713 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
ABCD3-201ENST00000315713 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
ABCD3-201ENST00000315713 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
ABCD3-201ENST00000315713 KDRP35968 1356 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 TJP1Q07157 1748 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 HMGB2P26583 209 aaKnown RBP16.43■□□□□ 0.22
ABCD3-201ENST00000315713 SSFA2P28290 1259 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 ITPK1Q13572 414 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 EYA1Q99502 592 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
ABCD3-201ENST00000315713 GNPATO15228 680 aa16.42■□□□□ 0.22
ABCD3-201ENST00000315713 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
ABCD3-201ENST00000315713 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
ABCD3-201ENST00000315713 NPC1L1Q9UHC9 1359 aa16.4■□□□□ 0.22
ABCD3-201ENST00000315713 PHKG2P15735 406 aa16.4■□□□□ 0.22
ABCD3-201ENST00000315713 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
ABCD3-201ENST00000315713 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
ABCD3-201ENST00000315713 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
ABCD3-201ENST00000315713 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
ABCD3-201ENST00000315713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■■□□□ 13.3
ABCD3-201ENST00000315713 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
ABCD3-201ENST00000315713 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
ABCD3-201ENST00000315713 MMP10P09238 476 aa16.37■□□□□ 0.21
ABCD3-201ENST00000315713 SBF1O95248 1867 aa16.37■□□□□ 0.21
ABCD3-201ENST00000315713 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
ABCD3-201ENST00000315713 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
ABCD3-201ENST00000315713 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
ABCD3-201ENST00000315713 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
ABCD3-201ENST00000315713 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
ABCD3-201ENST00000315713 HSPA6P17066 643 aa16.34■□□□□ 0.21
ABCD3-201ENST00000315713 MTHFSP49914 203 aa16.34■□□□□ 0.21
ABCD3-201ENST00000315713 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
ABCD3-201ENST00000315713 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.21
ABCD3-201ENST00000315713 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
ABCD3-201ENST00000315713 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
ABCD3-201ENST00000315713 DLEC1Q9Y238 1755 aa16.32■□□□□ 0.2
ABCD3-201ENST00000315713 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
ABCD3-201ENST00000315713 KIF3CO14782 793 aa16.31■□□□□ 0.2
ABCD3-201ENST00000315713 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
ABCD3-201ENST00000315713 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
ABCD3-201ENST00000315713 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
ABCD3-201ENST00000315713 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
ABCD3-201ENST00000315713 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
ABCD3-201ENST00000315713 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
ABCD3-201ENST00000315713 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
ABCD3-201ENST00000315713 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
ABCD3-201ENST00000315713 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
ABCD3-201ENST00000315713 GYS1P13807 737 aa16.28■□□□□ 0.2
ABCD3-201ENST00000315713 ADRA2BP18089 450 aa16.28■□□□□ 0.2
ABCD3-201ENST00000315713 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
ABCD3-201ENST00000315713 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
ABCD3-201ENST00000315713 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
ABCD3-201ENST00000315713 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
ABCD3-201ENST00000315713 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
ABCD3-201ENST00000315713 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
ABCD3-201ENST00000315713 DPEP1P16444 411 aa16.27■□□□□ 0.2
ABCD3-201ENST00000315713 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
ABCD3-201ENST00000315713 IL13P35225 146 aa16.27■□□□□ 0.2
ABCD3-201ENST00000315713 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
ABCD3-201ENST00000315713 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
ABCD3-201ENST00000315713 NRXN2Q9P2S2 1712 aa16.27■□□□□ 0.19
ABCD3-201ENST00000315713 RFC4P35249 363 aa16.26■□□□□ 0.19
ABCD3-201ENST00000315713 CABP4P57796 275 aa16.26■□□□□ 0.19
ABCD3-201ENST00000315713 TGFB2P61812 414 aa16.26■□□□□ 0.19
ABCD3-201ENST00000315713 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
ABCD3-201ENST00000315713 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
ABCD3-201ENST00000315713 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
ABCD3-201ENST00000315713 CACNA1SQ13698 1873 aa16.25■□□□□ 0.19
ABCD3-201ENST00000315713 MRC1P22897 1456 aa16.25■□□□□ 0.19
ABCD3-201ENST00000315713 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
ABCD3-201ENST00000315713 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
ABCD3-201ENST00000315713 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
ABCD3-201ENST00000315713 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
ABCD3-201ENST00000315713 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
ABCD3-201ENST00000315713 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
ABCD3-201ENST00000315713 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
ABCD3-201ENST00000315713 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
ABCD3-201ENST00000315713 FCHSD2O94868 740 aa16.23■□□□□ 0.19
ABCD3-201ENST00000315713 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
ABCD3-201ENST00000315713 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
ABCD3-201ENST00000315713 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
ABCD3-201ENST00000315713 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
ABCD3-201ENST00000315713 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
ABCD3-201ENST00000315713 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
ABCD3-201ENST00000315713 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
ABCD3-201ENST00000315713 DDR1Q08345 913 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms