RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
CTC1-201ENST00000315684 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 RXRBP28702 533 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
CTC1-201ENST00000315684 SLC5A1P13866 664 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
CTC1-201ENST00000315684 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
CTC1-201ENST00000315684 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 TRIM37O94972 964 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 KRT18P05783 430 aaKnown RBP10.8□□□□□ -0.68
CTC1-201ENST00000315684 XBP1P17861 261 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 MATR3P43243 847 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTC1-201ENST00000315684 PICALMQ13492 652 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 CCDC96Q2M329 555 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 LDHAL6AQ6ZMR3 332 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 CDK5RAP3Q96JB5 506 aa10.8□□□□□ -0.68
CTC1-201ENST00000315684 PRKG1Q13976 671 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 EAPPQ56P03 285 aaPredicted RBP10.79□□□□□ -0.68
CTC1-201ENST00000315684 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
CTC1-201ENST00000315684 SNRPA1P09661 255 aaKnown RBP10.79□□□□□ -0.68
CTC1-201ENST00000315684 TPM2P07951 284 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 CCDC47Q96A33 483 aaKnown RBP10.79□□□□□ -0.68
CTC1-201ENST00000315684 VTI1AQ96AJ9 217 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 CWC25Q9NXE8 425 aaPredicted RBP10.79□□□□□ -0.68
CTC1-201ENST00000315684 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 MYO1BO43795 1136 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 CHD1O14646 1710 aa10.79□□□□□ -0.68
CTC1-201ENST00000315684 NPATQ14207 1427 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 LTKP29376 864 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
CTC1-201ENST00000315684 CHPF2Q9P2E5 772 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 PAF1Q8N7H5 531 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 JDP2Q8WYK2 163 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 SCLT1Q96NL6 688 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
CTC1-201ENST00000315684 ARID3AQ99856 593 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 CDC5LQ99459 802 aaKnown RBP10.78□□□□□ -0.68
CTC1-201ENST00000315684 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
CTC1-201ENST00000315684 LRRFIP2Q9Y608 721 aaKnown RBP10.78□□□□□ -0.68
CTC1-201ENST00000315684 YEATS2Q9ULM3 1422 aa10.77□□□□□ -0.68
CTC1-201ENST00000315684 SOGA3Q5TF21 947 aa10.77□□□□□ -0.68
CTC1-201ENST00000315684 TMEM57Q8N5G2 664 aa10.77□□□□□ -0.68
CTC1-201ENST00000315684 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.68
CTC1-201ENST00000315684 HYPKQ9NX55 129 aa10.77□□□□□ -0.68
CTC1-201ENST00000315684 NAP1L5Q96NT1 182 aaPredicted RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 LMOD1P29536 600 aaPredicted RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 CA8P35219 290 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 NLRP3Q96P20 1036 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 RBM19Q9Y4C8 960 aaKnown RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
CTC1-201ENST00000315684 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
CTC1-201ENST00000315684 PI4KAP2A4QPH2 592 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 KCNQ4P56696 695 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 ATF7IPQ6VMQ6 1270 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 PI4KAP1Q8N8J0 262 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 DBF4Q9UBU7 674 aaPredicted RBP10.76□□□□□ -0.69
CTC1-201ENST00000315684 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTC1-201ENST00000315684 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
CTC1-201ENST00000315684 ZFYVE27Q5T4F4 411 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 VAT1LQ9HCJ6 419 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
CTC1-201ENST00000315684 EPS15P42566 896 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 ZFYVE16Q7Z3T8 1539 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 ANKRD18AQ8IVF6 992 aa10.76□□□□□ -0.69
CTC1-201ENST00000315684 PSMA5P28066 241 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 EIF4A2Q14240 407 aaKnown RBP10.75□□□□□ -0.69
CTC1-201ENST00000315684 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
CTC1-201ENST00000315684 AKAP2Q9Y2D5 859 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 BECN2A8MW95 431 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 CDC45O75419 566 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 PDE4AP27815 886 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 SCAF11Q99590 1463 aaKnown RBP10.75□□□□□ -0.69
CTC1-201ENST00000315684 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
CTC1-201ENST00000315684 PLS1Q14651 629 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 WDR63Q8IWG1 891 aa10.75□□□□□ -0.69
CTC1-201ENST00000315684 ZNF444Q8N0Y2 327 aaPredicted RBP10.75□□□□□ -0.69
CTC1-201ENST00000315684 ANKRD13DQ6ZTN6 518 aa10.74□□□□□ -0.69
CTC1-201ENST00000315684 ARHGAP27Q6ZUM4 889 aa10.74□□□□□ -0.69
CTC1-201ENST00000315684 GOLGA6L19H0YKK7 550 aa10.74□□□□□ -0.69
CTC1-201ENST00000315684 UTP14AQ9BVJ6 771 aaKnown RBP10.74□□□□□ -0.69
CTC1-201ENST00000315684 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
CTC1-201ENST00000315684 LIG1P18858 919 aa10.74□□□□□ -0.69
CTC1-201ENST00000315684 ABCC1P33527 1531 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 UGGT2Q9NYU1 1516 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 TMEM87AQ8NBN3 555 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 IFT57Q9NWB7 429 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 HOXC9P31274 260 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 TPTE2Q6XPS3 522 aa10.73□□□□□ -0.69
CTC1-201ENST00000315684 TBX22Q9Y458 520 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms