RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
EBF1-201ENST00000313708 SRCIN1Q9C0H9 1055 aa14.44□□□□□ -0.1
EBF1-201ENST00000313708 SMC1AQ14683 1233 aaKnown RBP14.43□□□□□ -0.1
EBF1-201ENST00000313708 GOLGA5Q8TBA6 731 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 SPTLC3Q9NUV7 552 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 GNAI1P63096 354 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 DHX16O60231 1041 aaKnown RBP14.43□□□□□ -0.1
EBF1-201ENST00000313708 GJB2P29033 226 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 RPAINQ86UA6 219 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 GBP3Q9H0R5 595 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 DACT1Q9NYF0 836 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
EBF1-201ENST00000313708 PDRG1Q9NUG6 133 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 CYP46A1Q9Y6A2 500 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 ZNF75DP51815 510 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 EVCP57679 992 aa14.43□□□□□ -0.1
EBF1-201ENST00000313708 KMT5BQ4FZB7 885 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 INSRP06213 1382 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 F13A1P00488 732 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 GNG11P61952 73 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 TWISTNBQ3B726 338 aaPredicted RBP14.42□□□□□ -0.1
EBF1-201ENST00000313708 RNF187Q5TA31 235 aaPredicted RBP14.42□□□□□ -0.1
EBF1-201ENST00000313708 NBPF11Q86T75 865 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 ZBTB40Q9NUA8 1239 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 ANO10Q9NW15 660 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 PES1O00541 588 aaKnown RBP14.42□□□□□ -0.1
EBF1-201ENST00000313708 ME1P48163 572 aa14.42□□□□□ -0.1
EBF1-201ENST00000313708 SCAND2PQ9GZW5 306 aaPredicted RBP14.42□□□□□ -0.1
EBF1-201ENST00000313708 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
EBF1-201ENST00000313708 OLFM4Q6UX06 510 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 JAKMIP1Q96N16 626 aaKnown RBP14.41□□□□□ -0.1
EBF1-201ENST00000313708 CRACR2AQ9BSW2 395 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
EBF1-201ENST00000313708 AKAP17AQ02040 695 aaKnown RBP14.41□□□□□ -0.1
EBF1-201ENST00000313708 TRIM66O15016 1216 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 CFAP100Q494V2 611 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
EBF1-201ENST00000313708 HECW1Q76N89 1606 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 BRD1O95696 1058 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 NRBP1Q9UHY1 535 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 NEBLO76041 1014 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 HMOX1P09601 288 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 SSR1P43307 286 aaKnown RBP14.4□□□□□ -0.1
EBF1-201ENST00000313708 GYS2P54840 703 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 STX1AQ16623 288 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 CCDC150Q8NCX0 1101 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 GEMIN8Q9NWZ8 242 aaKnown RBP14.4□□□□□ -0.1
EBF1-201ENST00000313708 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 LIG1P18858 919 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
EBF1-201ENST00000313708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.4□□□□□ -0.1
EBF1-201ENST00000313708 NCAPGQ9BPX3 1015 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
EBF1-201ENST00000313708 STK26Q9P289 416 aa14.4□□□□□ -0.1
EBF1-201ENST00000313708 PPP2R5AQ15172 486 aa14.39□□□□□ -0.11
EBF1-201ENST00000313708 DDX54Q8TDD1 881 aaKnown RBP14.39□□□□□ -0.11
EBF1-201ENST00000313708 CBX8Q9HC52 389 aa14.39□□□□□ -0.11
EBF1-201ENST00000313708 TSHZ3Q63HK5 1081 aa14.39□□□□□ -0.11
EBF1-201ENST00000313708 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
EBF1-201ENST00000313708 CARD6Q9BX69 1037 aa14.39□□□□□ -0.11
EBF1-201ENST00000313708 SEC31AO94979 1220 aaKnown RBP14.39□□□□□ -0.11
EBF1-201ENST00000313708 CFAP43Q8NDM7 1665 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 CBFA2T2O43439 604 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 TSR1Q2NL82 804 aaKnown RBP14.38□□□□□ -0.11
EBF1-201ENST00000313708 CEP57Q86XR8 500 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
EBF1-201ENST00000313708 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
EBF1-201ENST00000313708 ERLIN2O94905 339 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 CYP2C19P33261 490 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 INTS4Q96HW7 963 aaKnown RBP14.38□□□□□ -0.11
EBF1-201ENST00000313708 CEP83Q9Y592 693 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 EBAG9O00559 213 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 SOX12O15370 315 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
EBF1-201ENST00000313708 KIF4BQ2VIQ3 1234 aa14.38□□□□□ -0.11
EBF1-201ENST00000313708 PSMA5P28066 241 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
EBF1-201ENST00000313708 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 CLCN6P51797 869 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 CFAP45Q9UL16 551 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.11
EBF1-201ENST00000313708 USP16Q9Y5T5 823 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 VGFO15240 615 aaPredicted RBP14.37□□□□□ -0.11
EBF1-201ENST00000313708 RPAP2Q8IXW5 612 aaPredicted RBP14.37□□□□□ -0.11
EBF1-201ENST00000313708 YY1AP1Q9H869 796 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
EBF1-201ENST00000313708 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
EBF1-201ENST00000313708 DNAJC21Q5F1R6 531 aaKnown RBP14.36□□□□□ -0.11
EBF1-201ENST00000313708 TRMT2AQ8IZ69 625 aaKnown RBP14.36□□□□□ -0.11
EBF1-201ENST00000313708 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
EBF1-201ENST00000313708 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms