RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SOCS7O14512 581 aa29.26■■■□□ 2.27
CCDC85B-201ENST00000312579 GOLGA2Q08379 1002 aa29.26■■■□□ 2.27
CCDC85B-201ENST00000312579 MRC1P22897 1456 aa29.25■■■□□ 2.27
CCDC85B-201ENST00000312579 TAF7Q15545 349 aaPredicted RBP29.25■■■□□ 2.27
CCDC85B-201ENST00000312579 ITGB4P16144 1822 aa29.24■■■□□ 2.27
CCDC85B-201ENST00000312579 PIGBQ92521 554 aa29.24■■■□□ 2.27
CCDC85B-201ENST00000312579 TMOD3Q9NYL9 352 aa29.24■■■□□ 2.27
CCDC85B-201ENST00000312579 SIPA1L3O60292 1781 aaPredicted RBP29.23■■■□□ 2.27
CCDC85B-201ENST00000312579 CALD1Q05682 793 aaKnown RBP29.23■■■□□ 2.27
CCDC85B-201ENST00000312579 FAM196AQ6ZSG2 479 aa29.23■■■□□ 2.27
CCDC85B-201ENST00000312579 TSR2Q969E8 191 aaKnown RBP29.23■■■□□ 2.27
CCDC85B-201ENST00000312579 ZNF853P0CG23 659 aa29.22■■■□□ 2.27
CCDC85B-201ENST00000312579 BCL9O00512 1426 aa29.22■■■□□ 2.27
CCDC85B-201ENST00000312579 BTBD11A6QL63 1104 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 KCNQ3O43525 872 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 SLC39A6Q13433 755 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 CFAP44Q96MT7 982 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 IFT57Q9NWB7 429 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 IL16Q14005 1332 aa29.21■■■□□ 2.27
CCDC85B-201ENST00000312579 SLFN5Q08AF3 891 aa29.2■■■□□ 2.27
CCDC85B-201ENST00000312579 MBIPQ9NS73 344 aa29.2■■■□□ 2.27
CCDC85B-201ENST00000312579 EP400Q96L91 3159 aa29.2■■■□□ 2.26
CCDC85B-201ENST00000312579 CHL1O00533 1208 aa29.2■■■□□ 2.26
CCDC85B-201ENST00000312579 TSPYL4Q9UJ04 414 aa29.2■■■□□ 2.26
CCDC85B-201ENST00000312579 SBF2Q86WG5 1849 aa29.19■■■□□ 2.26
CCDC85B-201ENST00000312579 GNAI1P63096 354 aa29.19■■■□□ 2.26
CCDC85B-201ENST00000312579 E9PSI1 815 aa29.17■■■□□ 2.26
CCDC85B-201ENST00000312579 TRIM37O94972 964 aa29.17■■■□□ 2.26
CCDC85B-201ENST00000312579 ASAP1Q9ULH1 1129 aa29.17■■■□□ 2.26
CCDC85B-201ENST00000312579 FANCIQ9NVI1 1328 aa29.16■■■□□ 2.26
CCDC85B-201ENST00000312579 NHSQ6T4R5 1651 aa29.16■■■□□ 2.26
CCDC85B-201ENST00000312579 ATG3Q9NT62 314 aa29.15■■■□□ 2.26
CCDC85B-201ENST00000312579 DUSP27Q5VZP5 1158 aa29.14■■■□□ 2.25
CCDC85B-201ENST00000312579 TRMT2AQ8IZ69 625 aaKnown RBP29.14■■■□□ 2.25
CCDC85B-201ENST00000312579 MYH16Q9H6N6 1097 aa29.14■■■□□ 2.25
CCDC85B-201ENST00000312579 KRT24Q2M2I5 525 aa29.13■■■□□ 2.25
CCDC85B-201ENST00000312579 ZNF790Q6PG37 636 aa29.13■■■□□ 2.25
CCDC85B-201ENST00000312579 KDM3BQ7LBC6 1761 aa29.12■■■□□ 2.25
CCDC85B-201ENST00000312579 BCL11BQ9C0K0 894 aaPredicted RBP29.11■■■□□ 2.25
CCDC85B-201ENST00000312579 BABAM1Q9NWV8 329 aa29.1■■■□□ 2.25
CCDC85B-201ENST00000312579 BTAF1O14981 1849 aa29.1■■■□□ 2.25
CCDC85B-201ENST00000312579 PAPPAQ13219 1627 aa29.09■■■□□ 2.25
CCDC85B-201ENST00000312579 TTC5Q8N0Z6 440 aa29.09■■■□□ 2.25
CCDC85B-201ENST00000312579 PTCD1O75127 700 aaKnown RBP29.08■■■□□ 2.25
CCDC85B-201ENST00000312579 EIF4A1P60842 406 aaKnown RBP29.08■■■□□ 2.25
CCDC85B-201ENST00000312579 EXOSC9Q06265 439 aaKnown RBP29.08■■■□□ 2.25
CCDC85B-201ENST00000312579 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
CCDC85B-201ENST00000312579 ELL2O00472 640 aaPredicted RBP29.06■■■□□ 2.24
CCDC85B-201ENST00000312579 C8orf58Q8NAV2 365 aa29.06■■■□□ 2.24
CCDC85B-201ENST00000312579 TSPYL6Q8N831 410 aa29.05■■■□□ 2.24
CCDC85B-201ENST00000312579 KCPQ6ZWJ8 1503 aa29.05■■■□□ 2.24
CCDC85B-201ENST00000312579 RBM42Q9BTD8 480 aaKnown RBP29.04■■■□□ 2.24
CCDC85B-201ENST00000312579 PRAMEF22A3QJZ6 481 aa29.04■■■□□ 2.24
CCDC85B-201ENST00000312579 PALLDQ8WX93 1383 aa29.03■■■□□ 2.24
CCDC85B-201ENST00000312579 UBR2Q8IWV8 1755 aa29.02■■■□□ 2.24
CCDC85B-201ENST00000312579 SLC4A9Q96Q91 983 aa29.02■■■□□ 2.24
CCDC85B-201ENST00000312579 FMNL2Q96PY5 1086 aa29.01■■■□□ 2.23
CCDC85B-201ENST00000312579 SMARCC1Q92922 1105 aaPredicted RBP29■■■□□ 2.23
CCDC85B-201ENST00000312579 APBA3O96018 575 aa28.99■■■□□ 2.23
CCDC85B-201ENST00000312579 KCNQ4P56696 695 aa28.99■■■□□ 2.23
CCDC85B-201ENST00000312579 TNS1Q9HBL0 1735 aaKnown RBP28.99■■■□□ 2.23
CCDC85B-201ENST00000312579 HEG1Q9ULI3 1381 aa28.99■■■□□ 2.23
CCDC85B-201ENST00000312579 GIGYF1O75420 1035 aaPredicted RBP28.98■■■□□ 2.23
CCDC85B-201ENST00000312579 LOC102724428A0A0B4J2F2 783 aa28.97■■■□□ 2.23
CCDC85B-201ENST00000312579 SIK1P57059 783 aa28.97■■■□□ 2.23
CCDC85B-201ENST00000312579 TWISTNBQ3B726 338 aaPredicted RBP28.97■■■□□ 2.23
CCDC85B-201ENST00000312579 NECTIN2Q92692 538 aa28.95■■■□□ 2.23
CCDC85B-201ENST00000312579 C5P01031 1676 aa28.95■■■□□ 2.22
CCDC85B-201ENST00000312579 VAMP4O75379 141 aa28.94■■■□□ 2.22
CCDC85B-201ENST00000312579 SNRPA1P09661 255 aaKnown RBP28.94■■■□□ 2.22
CCDC85B-201ENST00000312579 DNAJC10Q8IXB1 793 aa28.94■■■□□ 2.22
CCDC85B-201ENST00000312579 USP16Q9Y5T5 823 aa28.94■■■□□ 2.22
CCDC85B-201ENST00000312579 TCERG1O14776 1098 aaKnown RBP28.93■■■□□ 2.22
CCDC85B-201ENST00000312579 EIF2S2P20042 333 aaKnown RBP28.93■■■□□ 2.22
CCDC85B-201ENST00000312579 ATP6V1AP38606 617 aa28.93■■■□□ 2.22
CCDC85B-201ENST00000312579 ITPK1Q13572 414 aa28.93■■■□□ 2.22
CCDC85B-201ENST00000312579 LY75O60449 1722 aa28.91■■■□□ 2.22
CCDC85B-201ENST00000312579 CCNL1Q9UK58 526 aaPredicted RBP28.9■■■□□ 2.22
CCDC85B-201ENST00000312579 VSIG10Q8N0Z9 540 aa28.89■■■□□ 2.22
CCDC85B-201ENST00000312579 PROM2Q8N271 834 aa28.89■■■□□ 2.22
CCDC85B-201ENST00000312579 TJP1Q07157 1748 aa28.89■■■□□ 2.22
CCDC85B-201ENST00000312579 EN1Q05925 392 aaPredicted RBP28.89■■■□□ 2.21
CCDC85B-201ENST00000312579 LRRC4BQ9NT99 713 aa28.89■■■□□ 2.21
CCDC85B-201ENST00000312579 PLSCR1O15162 318 aa28.88■■■□□ 2.21
CCDC85B-201ENST00000312579 SF3B2Q13435 895 aaKnown RBP28.88■■■□□ 2.21
CCDC85B-201ENST00000312579 DEFB132Q7Z7B7 95 aa28.88■■■□□ 2.21
CCDC85B-201ENST00000312579 HDGFL1Q5TGJ6 251 aa28.87■■■□□ 2.21
CCDC85B-201ENST00000312579 HOXB7P09629 217 aa28.86■■■□□ 2.21
CCDC85B-201ENST00000312579 PIP4K2AP48426 406 aaPredicted RBP28.86■■■□□ 2.21
CCDC85B-201ENST00000312579 TXNRD1Q16881 649 aa28.86■■■□□ 2.21
CCDC85B-201ENST00000312579 LINC00116Q8NCU8 138 aa28.85■■■□□ 2.21
CCDC85B-201ENST00000312579 BCL2L13Q9BXK5 485 aa28.85■■■□□ 2.21
CCDC85B-201ENST00000312579 CYP19A1P11511 503 aaPredicted RBP28.84■■■□□ 2.21
CCDC85B-201ENST00000312579 EZH2Q15910 746 aaKnown RBP28.84■■■□□ 2.21
CCDC85B-201ENST00000312579 UPF1Q92900 1129 aaKnown RBP eCLIP28.84■■■□□ 2.21
CCDC85B-201ENST00000312579 A1BGP04217 495 aa28.84■■■□□ 2.21
CCDC85B-201ENST00000312579 ANXA1P04083 346 aa28.83■■■□□ 2.21
CCDC85B-201ENST00000312579 SSH1Q8WYL5 1049 aa28.83■■■□□ 2.21
CCDC85B-201ENST00000312579 CAMKK2Q96RR4 588 aa28.83■■■□□ 2.21
CCDC85B-201ENST00000312579 TEX13AQ9BXU3 409 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms