RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 RNF187Q5TA31 235 aaPredicted RBP12.74□□□□□ -0.37
GGA2-201ENST00000309859 JAKMIP3Q5VZ66 844 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 ZBTB40Q9NUA8 1239 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 SLC26A8Q96RN1 970 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 KIF3BO15066 747 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 FBLN1P23142 703 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 ERCC4Q92889 916 aaPredicted RBP12.74□□□□□ -0.37
GGA2-201ENST00000309859 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 ARFGAP3Q9NP61 516 aa12.74□□□□□ -0.37
GGA2-201ENST00000309859 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
GGA2-201ENST00000309859 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 TRIM66O15016 1216 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 LTV1Q96GA3 475 aaPredicted RBP12.73□□□□□ -0.37
GGA2-201ENST00000309859 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
GGA2-201ENST00000309859 ATP2C2O75185 946 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
GGA2-201ENST00000309859 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
GGA2-201ENST00000309859 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
GGA2-201ENST00000309859 CDR1P51861 262 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 DNAJC21Q5F1R6 531 aaKnown RBP12.72□□□□□ -0.37
GGA2-201ENST00000309859 PDLIM2Q96JY6 352 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 MYCBPQ99417 103 aaPredicted RBP12.72□□□□□ -0.37
GGA2-201ENST00000309859 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 MLECQ14165 292 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 AOPEPQ8N6M6 819 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
GGA2-201ENST00000309859 A0A087WWV3 80 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 ERLIN1O75477 346 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 KIAA1524Q8TCG1 905 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
GGA2-201ENST00000309859 F13A1P00488 732 aa12.71□□□□□ -0.37
GGA2-201ENST00000309859 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
GGA2-201ENST00000309859 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
GGA2-201ENST00000309859 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
GGA2-201ENST00000309859 ANKRD20A12PQ8NF67 263 aa12.71□□□□□ -0.37
GGA2-201ENST00000309859 ZCCHC17Q9NP64 241 aaKnown RBP12.71□□□□□ -0.37
GGA2-201ENST00000309859 SUPT6HQ7KZ85 1726 aaKnown RBP12.71□□□□□ -0.38
GGA2-201ENST00000309859 EVCP57679 992 aa12.71□□□□□ -0.38
GGA2-201ENST00000309859 USP8P40818 1118 aa12.71□□□□□ -0.38
GGA2-201ENST00000309859 ABCC5O15440 1437 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
GGA2-201ENST00000309859 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
GGA2-201ENST00000309859 LIMCH1Q9UPQ0 1083 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 ARID5BQ14865 1188 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
GGA2-201ENST00000309859 STK38Q15208 465 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 CEP57Q86XR8 500 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 CCDC12Q8WUD4 166 aaPredicted RBP12.7□□□□□ -0.38
GGA2-201ENST00000309859 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 KMT5BQ4FZB7 885 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
GGA2-201ENST00000309859 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
GGA2-201ENST00000309859 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA2-201ENST00000309859 SYT1P21579 422 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 CCDC91Q7Z6B0 441 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 TESK2Q96S53 571 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
GGA2-201ENST00000309859 PDCP20941 246 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
GGA2-201ENST00000309859 CCP110O43303 1012 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 ZNF75DP51815 510 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 PDE6BP35913 854 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
GGA2-201ENST00000309859 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 TPM1P09493 284 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 TSPYL6Q8N831 410 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 EP400NLQ6ZTU2 488 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 RRP15Q9Y3B9 282 aaKnown RBP12.68□□□□□ -0.38
GGA2-201ENST00000309859 PTPN21Q16825 1174 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 SMC1AQ14683 1233 aaKnown RBP12.68□□□□□ -0.38
GGA2-201ENST00000309859 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 CNPY4Q8N129 248 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
GGA2-201ENST00000309859 GNAI2P04899 355 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
GGA2-201ENST00000309859 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
GGA2-201ENST00000309859 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 MYO1CO00159 1063 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 IVLP07476 585 aa12.67□□□□□ -0.38
GGA2-201ENST00000309859 AK2P54819 239 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms