RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ANP32AP39687 249 aaKnown RBP26.79■■□□□ 1.88
ATG4D-201ENST00000309469 KCNQ3O43525 872 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 HOXB7P09629 217 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 PLEKHG2Q9H7P9 1386 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 MEGF6O75095 1541 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 HDGFL1Q5TGJ6 251 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 KDM3BQ7LBC6 1761 aa26.78■■□□□ 1.88
ATG4D-201ENST00000309469 FLIIQ13045 1269 aa26.77■■□□□ 1.88
ATG4D-201ENST00000309469 CCT4P50991 539 aaKnown RBP26.76■■□□□ 1.87
ATG4D-201ENST00000309469 SIRT2Q8IXJ6 389 aa26.76■■□□□ 1.87
ATG4D-201ENST00000309469 CHMP4AQ9BY43 222 aa26.76■■□□□ 1.87
ATG4D-201ENST00000309469 NHSL1Q5SYE7 1610 aa26.75■■□□□ 1.87
ATG4D-201ENST00000309469 F6X3S4 739 aa26.75■■□□□ 1.87
ATG4D-201ENST00000309469 PHKG2P15735 406 aa26.75■■□□□ 1.87
ATG4D-201ENST00000309469 ADAMTS7Q9UKP4 1686 aa26.74■■□□□ 1.87
ATG4D-201ENST00000309469 GCC1Q96CN9 775 aa26.74■■□□□ 1.87
ATG4D-201ENST00000309469 NUCB1Q02818 461 aa26.73■■□□□ 1.87
ATG4D-201ENST00000309469 FKBP5Q13451 457 aaPredicted RBP26.73■■□□□ 1.87
ATG4D-201ENST00000309469 SLC4A10Q6U841 1118 aa26.73■■□□□ 1.87
ATG4D-201ENST00000309469 IFNL2Q8IZJ0 200 aa26.73■■□□□ 1.87
ATG4D-201ENST00000309469 WDR17Q8IZU2 1322 aa26.72■■□□□ 1.87
ATG4D-201ENST00000309469 EIF2S2P20042 333 aaKnown RBP26.72■■□□□ 1.87
ATG4D-201ENST00000309469 NPM2Q86SE8 214 aaKnown RBP26.72■■□□□ 1.87
ATG4D-201ENST00000309469 MEIS3Q99687 375 aa26.71■■□□□ 1.87
ATG4D-201ENST00000309469 KDM6AO15550 1401 aaPredicted RBP26.69■■□□□ 1.86
ATG4D-201ENST00000309469 TOM1L2Q6ZVM7 507 aa26.69■■□□□ 1.86
ATG4D-201ENST00000309469 CHD1LQ86WJ1 897 aa26.69■■□□□ 1.86
ATG4D-201ENST00000309469 RPAP2Q8IXW5 612 aaPredicted RBP26.69■■□□□ 1.86
ATG4D-201ENST00000309469 HEG1Q9ULI3 1381 aa26.69■■□□□ 1.86
ATG4D-201ENST00000309469 ABCA3Q99758 1704 aa26.68■■□□□ 1.86
ATG4D-201ENST00000309469 COL5A2P05997 1499 aaPredicted RBP26.68■■□□□ 1.86
ATG4D-201ENST00000309469 ANKRD44Q8N8A2 993 aa26.68■■□□□ 1.86
ATG4D-201ENST00000309469 SLC52A2Q9HAB3 445 aa26.68■■□□□ 1.86
ATG4D-201ENST00000309469 VIRMAQ69YN4 1812 aaKnown RBP26.68■■□□□ 1.86
ATG4D-201ENST00000309469 CYP27B1O15528 508 aa26.67■■□□□ 1.86
ATG4D-201ENST00000309469 GIGYF1O75420 1035 aaPredicted RBP26.67■■□□□ 1.86
ATG4D-201ENST00000309469 IPO9Q96P70 1041 aaKnown RBP26.67■■□□□ 1.86
ATG4D-201ENST00000309469 PHAXQ9H814 394 aaKnown RBP26.67■■□□□ 1.86
ATG4D-201ENST00000309469 SIPA1L3O60292 1781 aaPredicted RBP26.67■■□□□ 1.86
ATG4D-201ENST00000309469 DCAF5Q96JK2 942 aa26.67■■□□□ 1.86
ATG4D-201ENST00000309469 ATP10DQ9P241 1426 aa26.66■■□□□ 1.86
ATG4D-201ENST00000309469 CHPF2Q9P2E5 772 aa26.66■■□□□ 1.86
ATG4D-201ENST00000309469 ANKRD45Q5TZF3 282 aa26.65■■□□□ 1.86
ATG4D-201ENST00000309469 CEP85Q6P2H3 762 aa26.65■■□□□ 1.86
ATG4D-201ENST00000309469 LNPKQ9C0E8 428 aa26.65■■□□□ 1.86
ATG4D-201ENST00000309469 CACNA1FO60840 1977 aa26.65■■□□□ 1.86
ATG4D-201ENST00000309469 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
ATG4D-201ENST00000309469 PKD1L3Q7Z443 1732 aa26.64■■□□□ 1.86
ATG4D-201ENST00000309469 NFATC2IPQ8NCF5 419 aa26.64■■□□□ 1.86
ATG4D-201ENST00000309469 ERICH6Q7L0X2 663 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 CARD10Q9BWT7 1032 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 DCTPP1Q9H773 170 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 SCN11AQ9UI33 1791 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 ZNF790Q6PG37 636 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 ANP32EQ9BTT0 268 aa26.63■■□□□ 1.85
ATG4D-201ENST00000309469 PXDNLA1KZ92 1463 aa26.62■■□□□ 1.85
ATG4D-201ENST00000309469 DBF4Q9UBU7 674 aaPredicted RBP26.62■■□□□ 1.85
ATG4D-201ENST00000309469 EVA1CP58658 441 aa26.61■■□□□ 1.85
ATG4D-201ENST00000309469 GNAI3P08754 354 aa26.6■■□□□ 1.85
ATG4D-201ENST00000309469 ZCRB1Q8TBF4 217 aaKnown RBP26.6■■□□□ 1.85
ATG4D-201ENST00000309469 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
ATG4D-201ENST00000309469 GNAI2P04899 355 aa26.59■■□□□ 1.85
ATG4D-201ENST00000309469 SLC39A6Q13433 755 aa26.59■■□□□ 1.85
ATG4D-201ENST00000309469 LTBP4Q8N2S1 1624 aa26.59■■□□□ 1.85
ATG4D-201ENST00000309469 PRAMEF22A3QJZ6 481 aa26.59■■□□□ 1.85
ATG4D-201ENST00000309469 LARP1Q6PKG0 1096 aaKnown RBP26.59■■□□□ 1.85
ATG4D-201ENST00000309469 MRC1P22897 1456 aa26.58■■□□□ 1.85
ATG4D-201ENST00000309469 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
ATG4D-201ENST00000309469 ANXA1P04083 346 aa26.57■■□□□ 1.84
ATG4D-201ENST00000309469 IL2RBP14784 551 aa26.57■■□□□ 1.84
ATG4D-201ENST00000309469 NOP58Q9Y2X3 529 aaKnown RBP26.57■■□□□ 1.84
ATG4D-201ENST00000309469 PCDH11XQ9BZA7 1347 aa26.57■■□□□ 1.84
ATG4D-201ENST00000309469 PCDH11YQ9BZA8 1340 aa26.57■■□□□ 1.84
ATG4D-201ENST00000309469 PARP4Q9UKK3 1724 aaKnown RBP26.57■■□□□ 1.84
ATG4D-201ENST00000309469 HMMRO75330 724 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 SEC24BO95487 1268 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 CABP4P57796 275 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 AHDC1Q5TGY3 1603 aaPredicted RBP26.55■■□□□ 1.84
ATG4D-201ENST00000309469 PI4KAP2A4QPH2 592 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 PI4KAP1Q8N8J0 262 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 DNAAF4Q8WXU2 420 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 SRCIN1Q9C0H9 1055 aa26.55■■□□□ 1.84
ATG4D-201ENST00000309469 USP44Q9H0E7 712 aa26.54■■□□□ 1.84
ATG4D-201ENST00000309469 N4BP2Q86UW6 1770 aaPredicted RBP26.53■■□□□ 1.84
ATG4D-201ENST00000309469 PROSER3Q2NL68 480 aa26.53■■□□□ 1.84
ATG4D-201ENST00000309469 HYPKQ9NX55 129 aa26.53■■□□□ 1.84
ATG4D-201ENST00000309469 TTC5Q8N0Z6 440 aa26.53■■□□□ 1.84
ATG4D-201ENST00000309469 ZBTB47Q9UFB7 747 aaPredicted RBP26.53■■□□□ 1.84
ATG4D-201ENST00000309469 BEND3Q5T5X7 828 aa26.52■■□□□ 1.84
ATG4D-201ENST00000309469 ZNF496Q96IT1 587 aaPredicted RBP26.52■■□□□ 1.84
ATG4D-201ENST00000309469 DDX21Q9NR30 783 aaKnown RBP eCLIP26.52■■□□□ 1.84
ATG4D-201ENST00000309469 BTG4Q9NY30 223 aa26.52■■□□□ 1.84
ATG4D-201ENST00000309469 ADCY9O60503 1353 aa26.51■■□□□ 1.83
ATG4D-201ENST00000309469 NKX1-1Q15270 411 aaPredicted RBP26.51■■□□□ 1.83
ATG4D-201ENST00000309469 DDRGK1Q96HY6 314 aa26.51■■□□□ 1.83
ATG4D-201ENST00000309469 UBTFL1P0CB47 393 aaPredicted RBP26.49■■□□□ 1.83
ATG4D-201ENST00000309469 PDIA6Q15084 440 aa26.49■■□□□ 1.83
ATG4D-201ENST00000309469 ATP8B2P98198 1209 aa26.49■■□□□ 1.83
ATG4D-201ENST00000309469 KSR2Q6VAB6 950 aa26.49■■□□□ 1.83
ATG4D-201ENST00000309469 FMNL2Q96PY5 1086 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms