RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
GPBP1-202ENST00000309096 BACH1O14867 736 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 GTF2E1P29083 439 aaPredicted RBP8.7□□□□□ -1.02
GPBP1-202ENST00000309096 PTSQ03393 145 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 LYSMD3Q7Z3D4 306 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
GPBP1-202ENST00000309096 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
GPBP1-202ENST00000309096 SPATA31C2B4DYI2 1134 aa8.69□□□□□ -1.02
GPBP1-202ENST00000309096 RASA1P20936 1047 aa8.69□□□□□ -1.02
GPBP1-202ENST00000309096 PRICKLE2Q7Z3G6 844 aa8.69□□□□□ -1.02
GPBP1-202ENST00000309096 SLC4A9Q96Q91 983 aa8.69□□□□□ -1.02
GPBP1-202ENST00000309096 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
GPBP1-202ENST00000309096 SLC35F4A4IF30 521 aa8.68□□□□□ -1.02
GPBP1-202ENST00000309096 RFX1P22670 979 aa8.68□□□□□ -1.02
GPBP1-202ENST00000309096 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
GPBP1-202ENST00000309096 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
GPBP1-202ENST00000309096 SIX5Q8N196 739 aa8.68□□□□□ -1.02
GPBP1-202ENST00000309096 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
GPBP1-202ENST00000309096 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 MTFR1Q15390 333 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 CRTC2Q53ET0 693 aaPredicted RBP8.67□□□□□ -1.02
GPBP1-202ENST00000309096 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 NPAS3Q8IXF0 933 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
GPBP1-202ENST00000309096 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 SLC16A10Q8TF71 515 aa8.67□□□□□ -1.02
GPBP1-202ENST00000309096 SMTNP53814 917 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 EPHA4P54764 986 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 PTK7Q13308 1070 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 TLR1Q15399 786 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 NBPF10Q6P3W6 841 aaKnown RBP8.66□□□□□ -1.02
GPBP1-202ENST00000309096 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 PBXIP1Q96AQ6 731 aa8.66□□□□□ -1.02
GPBP1-202ENST00000309096 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
GPBP1-202ENST00000309096 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
GPBP1-202ENST00000309096 H3BM21 787 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 PPFIA3O75145 1194 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
GPBP1-202ENST00000309096 RHOQP17081 205 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 POU4F2Q12837 409 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 WDR44Q5JSH3 913 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
GPBP1-202ENST00000309096 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
GPBP1-202ENST00000309096 SERTAD1Q9UHV2 236 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
GPBP1-202ENST00000309096 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L15C9J2P7 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L13C9JLJ4 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L12C9JPN9 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L11C9JVI0 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L21D6R901 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L18D6R9N7 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L22D6RA61 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L17D6RBQ6 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L19D6RCP7 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L20D6RJB6 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 VEGFBP49765 207 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 USP17L24Q0WX57 530 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 CCDC155Q8N6L0 562 aa8.64□□□□□ -1.03
GPBP1-202ENST00000309096 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
GPBP1-202ENST00000309096 A6NJY4 79 aa8.63□□□□□ -1.03
GPBP1-202ENST00000309096 M0R2N6 131 aa8.63□□□□□ -1.03
GPBP1-202ENST00000309096 TAS1R3Q7RTX0 852 aa8.63□□□□□ -1.03
GPBP1-202ENST00000309096 ARXQ96QS3 562 aa8.63□□□□□ -1.03
GPBP1-202ENST00000309096 SEC13P55735 322 aa8.62□□□□□ -1.03
GPBP1-202ENST00000309096 FOXK2Q01167 660 aa8.62□□□□□ -1.03
GPBP1-202ENST00000309096 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
GPBP1-202ENST00000309096 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
GPBP1-202ENST00000309096 SCHIP1Q9P0W5 487 aaPredicted RBP8.62□□□□□ -1.03
GPBP1-202ENST00000309096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
GPBP1-202ENST00000309096 SFI1A8K8P3 1242 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
GPBP1-202ENST00000309096 GNASQ5JWF2 1037 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
GPBP1-202ENST00000309096 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 ATG7O95352 703 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 DPYDQ12882 1025 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 ANKMY2Q8IV38 441 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 FAM200AQ8TCP9 573 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 DYRK1BQ9Y463 629 aa8.61□□□□□ -1.03
GPBP1-202ENST00000309096 ITGA6P23229 1130 aa8.6□□□□□ -1.03
GPBP1-202ENST00000309096 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
GPBP1-202ENST00000309096 TNS4Q8IZW8 715 aa8.6□□□□□ -1.03
GPBP1-202ENST00000309096 TSEN2Q8NCE0 465 aaKnown RBP8.6□□□□□ -1.03
GPBP1-202ENST00000309096 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
GPBP1-202ENST00000309096 PHKA2P46019 1235 aa8.59□□□□□ -1.03
GPBP1-202ENST00000309096 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
GPBP1-202ENST00000309096 ARID3AQ99856 593 aa8.59□□□□□ -1.03
GPBP1-202ENST00000309096 ZMIZ1Q9ULJ6 1067 aa8.59□□□□□ -1.03
GPBP1-202ENST00000309096 TIMMDC1Q9NPL8 285 aa8.58□□□□□ -1.04
GPBP1-202ENST00000309096 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
GPBP1-202ENST00000309096 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
GPBP1-202ENST00000309096 THBS1P07996 1170 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms