RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 CALD1Q05682 793 aaKnown RBP22.3■■□□□ 1.16
NDUFA11-201ENST00000308961 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
NDUFA11-201ENST00000308961 CFAP44Q96MT7 982 aa22.3■■□□□ 1.16
NDUFA11-201ENST00000308961 IFT57Q9NWB7 429 aa22.3■■□□□ 1.16
NDUFA11-201ENST00000308961 MRC1P22897 1456 aa22.29■■□□□ 1.16
NDUFA11-201ENST00000308961 KCNQ3O43525 872 aa22.29■■□□□ 1.16
NDUFA11-201ENST00000308961 KCNQ2O43526 872 aa22.29■■□□□ 1.16
NDUFA11-201ENST00000308961 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
NDUFA11-201ENST00000308961 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
NDUFA11-201ENST00000308961 SIPA1L3O60292 1781 aaPredicted RBP22.28■■□□□ 1.16
NDUFA11-201ENST00000308961 E9PSI1 815 aa22.28■■□□□ 1.16
NDUFA11-201ENST00000308961 GNAI1P63096 354 aa22.28■■□□□ 1.16
NDUFA11-201ENST00000308961 PIGBQ92521 554 aa22.28■■□□□ 1.16
NDUFA11-201ENST00000308961 BTBD11A6QL63 1104 aa22.27■■□□□ 1.16
NDUFA11-201ENST00000308961 BCL9O00512 1426 aa22.27■■□□□ 1.16
NDUFA11-201ENST00000308961 SLC39A6Q13433 755 aa22.27■■□□□ 1.16
NDUFA11-201ENST00000308961 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
NDUFA11-201ENST00000308961 DOT1LQ8TEK3 1739 aa22.27■■□□□ 1.16
NDUFA11-201ENST00000308961 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
NDUFA11-201ENST00000308961 TMOD3Q9NYL9 352 aa22.26■■□□□ 1.15
NDUFA11-201ENST00000308961 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
NDUFA11-201ENST00000308961 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
NDUFA11-201ENST00000308961 ITGB4P16144 1822 aa22.25■■□□□ 1.15
NDUFA11-201ENST00000308961 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
NDUFA11-201ENST00000308961 MYH16Q9H6N6 1097 aa22.24■■□□□ 1.15
NDUFA11-201ENST00000308961 BABAM1Q9NWV8 329 aa22.24■■□□□ 1.15
NDUFA11-201ENST00000308961 KRT24Q2M2I5 525 aa22.22■■□□□ 1.15
NDUFA11-201ENST00000308961 ATG3Q9NT62 314 aa22.22■■□□□ 1.15
NDUFA11-201ENST00000308961 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
NDUFA11-201ENST00000308961 EXOSC9Q06265 439 aaKnown RBP22.21■■□□□ 1.15
NDUFA11-201ENST00000308961 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
NDUFA11-201ENST00000308961 C8orf58Q8NAV2 365 aa22.2■■□□□ 1.14
NDUFA11-201ENST00000308961 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
NDUFA11-201ENST00000308961 SBF2Q86WG5 1849 aa22.2■■□□□ 1.14
NDUFA11-201ENST00000308961 KAT6BQ8WYB5 2073 aa22.19■■□□□ 1.14
NDUFA11-201ENST00000308961 EIF4A1P60842 406 aaKnown RBP22.19■■□□□ 1.14
NDUFA11-201ENST00000308961 TSPYL6Q8N831 410 aa22.19■■□□□ 1.14
NDUFA11-201ENST00000308961 TRIM37O94972 964 aa22.18■■□□□ 1.14
NDUFA11-201ENST00000308961 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
NDUFA11-201ENST00000308961 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
NDUFA11-201ENST00000308961 ELL2O00472 640 aaPredicted RBP22.16■■□□□ 1.14
NDUFA11-201ENST00000308961 BCL11BQ9C0K0 894 aaPredicted RBP22.16■■□□□ 1.14
NDUFA11-201ENST00000308961 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
NDUFA11-201ENST00000308961 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
NDUFA11-201ENST00000308961 PRAMEF22A3QJZ6 481 aa22.14■■□□□ 1.13
NDUFA11-201ENST00000308961 PTCD1O75127 700 aaKnown RBP22.14■■□□□ 1.13
NDUFA11-201ENST00000308961 TTC5Q8N0Z6 440 aa22.14■■□□□ 1.13
NDUFA11-201ENST00000308961 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.13
NDUFA11-201ENST00000308961 VAMP4O75379 141 aa22.13■■□□□ 1.13
NDUFA11-201ENST00000308961 SLC4A9Q96Q91 983 aa22.13■■□□□ 1.13
NDUFA11-201ENST00000308961 BTAF1O14981 1849 aa22.12■■□□□ 1.13
NDUFA11-201ENST00000308961 GIGYF1O75420 1035 aaPredicted RBP22.11■■□□□ 1.13
NDUFA11-201ENST00000308961 TWISTNBQ3B726 338 aaPredicted RBP22.11■■□□□ 1.13
NDUFA11-201ENST00000308961 FMNL2Q96PY5 1086 aa22.11■■□□□ 1.13
NDUFA11-201ENST00000308961 RBM42Q9BTD8 480 aaKnown RBP22.11■■□□□ 1.13
NDUFA11-201ENST00000308961 UBR2Q8IWV8 1755 aa22.1■■□□□ 1.13
NDUFA11-201ENST00000308961 PALLDQ8WX93 1383 aa22.1■■□□□ 1.13
NDUFA11-201ENST00000308961 SMARCC1Q92922 1105 aaPredicted RBP22.09■■□□□ 1.13
NDUFA11-201ENST00000308961 USP16Q9Y5T5 823 aa22.08■■□□□ 1.13
NDUFA11-201ENST00000308961 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
NDUFA11-201ENST00000308961 SNRPA1P09661 255 aaKnown RBP22.07■■□□□ 1.12
NDUFA11-201ENST00000308961 LOC102724428A0A0B4J2F2 783 aa22.06■■□□□ 1.12
NDUFA11-201ENST00000308961 KCNQ4P56696 695 aa22.06■■□□□ 1.12
NDUFA11-201ENST00000308961 SIK1P57059 783 aa22.06■■□□□ 1.12
NDUFA11-201ENST00000308961 DNAJC10Q8IXB1 793 aa22.06■■□□□ 1.12
NDUFA11-201ENST00000308961 APBA3O96018 575 aa22.05■■□□□ 1.12
NDUFA11-201ENST00000308961 NECTIN2Q92692 538 aa22.05■■□□□ 1.12
NDUFA11-201ENST00000308961 C5P01031 1676 aa22.04■■□□□ 1.12
NDUFA11-201ENST00000308961 EIF2S2P20042 333 aaKnown RBP22.04■■□□□ 1.12
NDUFA11-201ENST00000308961 ITPK1Q13572 414 aa22.04■■□□□ 1.12
NDUFA11-201ENST00000308961 VSIG10Q8N0Z9 540 aa22.04■■□□□ 1.12
NDUFA11-201ENST00000308961 HOXB7P09629 217 aa22.03■■□□□ 1.12
NDUFA11-201ENST00000308961 CT47B1P0C2W7 299 aaPredicted RBP22.03■■□□□ 1.12
NDUFA11-201ENST00000308961 ATP6V1AP38606 617 aa22.03■■□□□ 1.12
NDUFA11-201ENST00000308961 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
NDUFA11-201ENST00000308961 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 ILDR2Q71H61 639 aa22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 PROM2Q8N271 834 aa22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.12
NDUFA11-201ENST00000308961 BCAR3O75815 825 aa22.01■■□□□ 1.11
NDUFA11-201ENST00000308961 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
NDUFA11-201ENST00000308961 BCL2L13Q9BXK5 485 aa22.01■■□□□ 1.11
NDUFA11-201ENST00000308961 TJP1Q07157 1748 aa22■■□□□ 1.11
NDUFA11-201ENST00000308961 PLSCR1O15162 318 aa22■■□□□ 1.11
NDUFA11-201ENST00000308961 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
NDUFA11-201ENST00000308961 LY75O60449 1722 aa22■■□□□ 1.11
NDUFA11-201ENST00000308961 A1BGP04217 495 aa21.99■■□□□ 1.11
NDUFA11-201ENST00000308961 CYP19A1P11511 503 aaPredicted RBP21.99■■□□□ 1.11
NDUFA11-201ENST00000308961 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
NDUFA11-201ENST00000308961 ANXA1P04083 346 aa21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 PDIA6Q15084 440 aa21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 PROSER3Q2NL68 480 aa21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 CCDC30Q5VVM6 783 aa21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 MRPL50Q8N5N7 158 aaKnown RBP21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
NDUFA11-201ENST00000308961 TEX13AQ9BXU3 409 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms