RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
MUC4-201ENST00000308466 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 FLT4P35916 1363 aa12.96□□□□□ -0.33
MUC4-201ENST00000308466 MSH6P52701 1360 aa12.96□□□□□ -0.34
MUC4-201ENST00000308466 PANK2Q9BZ23 570 aa12.96□□□□□ -0.34
MUC4-201ENST00000308466 TBX22Q9Y458 520 aa12.96□□□□□ -0.34
MUC4-201ENST00000308466 ABCC4O15439 1325 aa12.96□□□□□ -0.34
MUC4-201ENST00000308466 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
MUC4-201ENST00000308466 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
MUC4-201ENST00000308466 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 R3HCC1Q9Y3T6 440 aaKnown RBP12.95□□□□□ -0.34
MUC4-201ENST00000308466 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 PPP1R42Q7Z4L9 355 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
MUC4-201ENST00000308466 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
MUC4-201ENST00000308466 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 ATF3P18847 181 aa12.95□□□□□ -0.34
MUC4-201ENST00000308466 SNX21Q969T3 373 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 A2ML1A8K2U0 1454 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 HOXC9P31274 260 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
MUC4-201ENST00000308466 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
MUC4-201ENST00000308466 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
MUC4-201ENST00000308466 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
MUC4-201ENST00000308466 ESPNB1AK53 854 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
MUC4-201ENST00000308466 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
MUC4-201ENST00000308466 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
MUC4-201ENST00000308466 PNPLA6Q8IY17 1366 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 PTPRMP28827 1452 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 DIP2CQ9Y2E4 1556 aa12.93□□□□□ -0.34
MUC4-201ENST00000308466 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
MUC4-201ENST00000308466 GORABQ5T7V8 394 aa12.92□□□□□ -0.34
MUC4-201ENST00000308466 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
MUC4-201ENST00000308466 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
MUC4-201ENST00000308466 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
MUC4-201ENST00000308466 CAMSAP1Q5T5Y3 1602 aa12.92□□□□□ -0.34
MUC4-201ENST00000308466 SIRT1Q96EB6 747 aa12.92□□□□□ -0.34
MUC4-201ENST00000308466 ATP7BP35670 1465 aa12.92□□□□□ -0.34
MUC4-201ENST00000308466 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
MUC4-201ENST00000308466 TPM2P07951 284 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 PNMA6EA0A0J9YXQ4 647 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 AACSQ86V21 672 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 PIK3R4Q99570 1358 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
MUC4-201ENST00000308466 MCM2P49736 904 aa12.9□□□□□ -0.34
MUC4-201ENST00000308466 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
MUC4-201ENST00000308466 FSD1Q9BTV5 496 aa12.9□□□□□ -0.34
MUC4-201ENST00000308466 CD2BP2O95400 341 aaKnown RBP12.9□□□□□ -0.34
MUC4-201ENST00000308466 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
MUC4-201ENST00000308466 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
MUC4-201ENST00000308466 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
MUC4-201ENST00000308466 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
MUC4-201ENST00000308466 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
MUC4-201ENST00000308466 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
MUC4-201ENST00000308466 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 DBF4Q9UBU7 674 aaPredicted RBP12.89□□□□□ -0.35
MUC4-201ENST00000308466 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 MYOM1P52179 1685 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 CLCN1P35523 988 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
MUC4-201ENST00000308466 CCDC8Q9H0W5 538 aaPredicted RBP12.89□□□□□ -0.35
MUC4-201ENST00000308466 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
MUC4-201ENST00000308466 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 MPNDQ8N594 471 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 ESYT1Q9BSJ8 1104 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 FIBPO43427 364 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
MUC4-201ENST00000308466 EVA1CP58658 441 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 TMX3Q96JJ7 454 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
MUC4-201ENST00000308466 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
MUC4-201ENST00000308466 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 824.4 ms