RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PHF14O94880 888 aa22.97■■□□□ 1.27
HMGCLL1-202ENST00000308161 HMGB2P26583 209 aaKnown RBP22.97■■□□□ 1.27
HMGCLL1-202ENST00000308161 MSL1Q68DK7 614 aa22.97■■□□□ 1.27
HMGCLL1-202ENST00000308161 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
HMGCLL1-202ENST00000308161 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
HMGCLL1-202ENST00000308161 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
HMGCLL1-202ENST00000308161 ITPK1Q13572 414 aa22.95■■□□□ 1.26
HMGCLL1-202ENST00000308161 SMIM5Q71RC9 77 aa22.95■■□□□ 1.26
HMGCLL1-202ENST00000308161 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
HMGCLL1-202ENST00000308161 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
HMGCLL1-202ENST00000308161 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
HMGCLL1-202ENST00000308161 FLAD1Q8NFF5 587 aa22.93■■□□□ 1.26
HMGCLL1-202ENST00000308161 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
HMGCLL1-202ENST00000308161 AMIGO3Q86WK7 504 aa22.92■■□□□ 1.26
HMGCLL1-202ENST00000308161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.91■■□□□ 1.26
HMGCLL1-202ENST00000308161 GNPATO15228 680 aa22.91■■□□□ 1.26
HMGCLL1-202ENST00000308161 MTHFSDQ2M296 383 aaKnown RBP22.91■■□□□ 1.26
HMGCLL1-202ENST00000308161 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
HMGCLL1-202ENST00000308161 PPP2R1AP30153 589 aa22.89■■□□□ 1.26
HMGCLL1-202ENST00000308161 SLC4A9Q96Q91 983 aa22.89■■□□□ 1.26
HMGCLL1-202ENST00000308161 LGR6Q9HBX8 967 aa22.89■■□□□ 1.26
HMGCLL1-202ENST00000308161 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
HMGCLL1-202ENST00000308161 SCN11AQ9UI33 1791 aa22.87■■□□□ 1.25
HMGCLL1-202ENST00000308161 RNMTO43148 476 aaKnown RBP22.86■■□□□ 1.25
HMGCLL1-202ENST00000308161 SSFA2P28290 1259 aa22.86■■□□□ 1.25
HMGCLL1-202ENST00000308161 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
HMGCLL1-202ENST00000308161 COL24A1Q17RW2 1714 aa22.85■■□□□ 1.25
HMGCLL1-202ENST00000308161 NUDCQ9Y266 331 aa22.84■■□□□ 1.25
HMGCLL1-202ENST00000308161 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
HMGCLL1-202ENST00000308161 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.25
HMGCLL1-202ENST00000308161 RTCBQ9Y3I0 505 aaKnown RBP22.83■■□□□ 1.25
HMGCLL1-202ENST00000308161 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 YY1P25490 414 aa22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 SLC39A6Q13433 755 aa22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 NLGN2Q8NFZ4 835 aa22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
HMGCLL1-202ENST00000308161 GPR162Q16538 588 aa22.8■■□□□ 1.24
HMGCLL1-202ENST00000308161 TRAPPC3LQ5T215 181 aa22.8■■□□□ 1.24
HMGCLL1-202ENST00000308161 COL5A3P25940 1745 aaPredicted RBP22.8■■□□□ 1.24
HMGCLL1-202ENST00000308161 MRC1P22897 1456 aa22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 CNTNAP4Q9C0A0 1308 aa22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 ZNF831Q5JPB2 1677 aa22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 RSPH6AQ9H0K4 717 aa22.79■■□□□ 1.24
HMGCLL1-202ENST00000308161 UTRNP46939 3433 aa22.78■■□□□ 1.24
HMGCLL1-202ENST00000308161 RC3H1Q5TC82 1133 aaKnown RBP22.78■■□□□ 1.24
HMGCLL1-202ENST00000308161 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
HMGCLL1-202ENST00000308161 CRKLP46109 303 aaKnown RBP22.77■■□□□ 1.24
HMGCLL1-202ENST00000308161 TEFQ10587 303 aa22.77■■□□□ 1.24
HMGCLL1-202ENST00000308161 DNAJC10Q8IXB1 793 aa22.77■■□□□ 1.24
HMGCLL1-202ENST00000308161 RPS6KA4O75676 772 aa22.76■■□□□ 1.23
HMGCLL1-202ENST00000308161 RFC4P35249 363 aa22.76■■□□□ 1.23
HMGCLL1-202ENST00000308161 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
HMGCLL1-202ENST00000308161 TJP1Q07157 1748 aa22.75■■□□□ 1.23
HMGCLL1-202ENST00000308161 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
HMGCLL1-202ENST00000308161 ADAMTS7Q9UKP4 1686 aa22.74■■□□□ 1.23
HMGCLL1-202ENST00000308161 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
HMGCLL1-202ENST00000308161 ADRA2BP18089 450 aa22.74■■□□□ 1.23
HMGCLL1-202ENST00000308161 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
HMGCLL1-202ENST00000308161 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
HMGCLL1-202ENST00000308161 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
HMGCLL1-202ENST00000308161 MMP10P09238 476 aa22.73■■□□□ 1.23
HMGCLL1-202ENST00000308161 CD2APQ9Y5K6 639 aa22.72■■□□□ 1.23
HMGCLL1-202ENST00000308161 KCPQ6ZWJ8 1503 aa22.71■■□□□ 1.23
HMGCLL1-202ENST00000308161 FCHSD2O94868 740 aa22.71■■□□□ 1.23
HMGCLL1-202ENST00000308161 INTS5Q6P9B9 1019 aaKnown RBP22.7■■□□□ 1.22
HMGCLL1-202ENST00000308161 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
HMGCLL1-202ENST00000308161 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
HMGCLL1-202ENST00000308161 NLGN1Q8N2Q7 840 aa22.69■■□□□ 1.22
HMGCLL1-202ENST00000308161 RTF1Q92541 710 aaKnown RBP22.69■■□□□ 1.22
HMGCLL1-202ENST00000308161 SRP68Q9UHB9 627 aaKnown RBP22.69■■□□□ 1.22
HMGCLL1-202ENST00000308161 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
HMGCLL1-202ENST00000308161 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
HMGCLL1-202ENST00000308161 GYS1P13807 737 aa22.68■■□□□ 1.22
HMGCLL1-202ENST00000308161 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
HMGCLL1-202ENST00000308161 NEFMP07197 916 aa22.67■■□□□ 1.22
HMGCLL1-202ENST00000308161 MCM10Q7L590 875 aa22.67■■□□□ 1.22
HMGCLL1-202ENST00000308161 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.22
HMGCLL1-202ENST00000308161 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
HMGCLL1-202ENST00000308161 ZNF496Q96IT1 587 aaPredicted RBP22.66■■□□□ 1.22
HMGCLL1-202ENST00000308161 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
HMGCLL1-202ENST00000308161 BTBD11A6QL63 1104 aa22.65■■□□□ 1.22
HMGCLL1-202ENST00000308161 DCTN1Q14203 1278 aa22.65■■□□□ 1.22
HMGCLL1-202ENST00000308161 VSIG10Q8N0Z9 540 aa22.65■■□□□ 1.22
HMGCLL1-202ENST00000308161 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
HMGCLL1-202ENST00000308161 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
HMGCLL1-202ENST00000308161 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.22
HMGCLL1-202ENST00000308161 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.22
HMGCLL1-202ENST00000308161 RALBP1Q15311 655 aa22.64■■□□□ 1.22
HMGCLL1-202ENST00000308161 PARP3Q9Y6F1 533 aa22.64■■□□□ 1.22
HMGCLL1-202ENST00000308161 SOS1Q07889 1333 aaPredicted RBP22.64■■□□□ 1.21
HMGCLL1-202ENST00000308161 ZPR1O75312 459 aa22.63■■□□□ 1.21
HMGCLL1-202ENST00000308161 FKBP8Q14318 412 aa22.63■■□□□ 1.21
HMGCLL1-202ENST00000308161 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
HMGCLL1-202ENST00000308161 KCNQ3O43525 872 aa22.62■■□□□ 1.21
HMGCLL1-202ENST00000308161 STARD3NLO95772 234 aa22.62■■□□□ 1.21
HMGCLL1-202ENST00000308161 HEG1Q9ULI3 1381 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms