RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NRAPQ86VF7 1730 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 SIPA1L3O60292 1781 aaPredicted RBP9□□□□□ -0.97
PTCD2-201ENST00000308077 AKAP4Q5JQC9 854 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 ERICH6BQ5W0A0 696 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
PTCD2-201ENST00000308077 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 TSPYL6Q8N831 410 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 RAPGEF4Q8WZA2 1011 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 BCL2L13Q9BXK5 485 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 STRN4Q9NRL3 753 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 OVOS2A0A0G2JMS6 1433 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
PTCD2-201ENST00000308077 LGR6Q9HBX8 967 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 BTG4Q9NY30 223 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 MIS18AQ9NYP9 233 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 KDM3BQ7LBC6 1761 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 SCN11AQ9UI33 1791 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 C8orf58Q8NAV2 365 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
PTCD2-201ENST00000308077 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 VAMP4O75379 141 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 KRT24Q2M2I5 525 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 EXOC6Q8TAG9 804 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 SSH1Q8WYL5 1049 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 USP21Q9UK80 565 aa8.98□□□□□ -0.97
PTCD2-201ENST00000308077 ELL2O00472 640 aaPredicted RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 RNMTO43148 476 aaKnown RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 HSPA1AP0DMV8 641 aaKnown RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 HSPA1BP0DMV9 641 aaKnown RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 EVA1CP58658 441 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 C1orf141Q5JVX7 400 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.97□□□□□ -0.976e-7■■□□□ 12.6
PTCD2-201ENST00000308077 TSPYL4Q9UJ04 414 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 ATP10DQ9P241 1426 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 TWISTNBQ3B726 338 aaPredicted RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.97□□□□□ -0.97
PTCD2-201ENST00000308077 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
PTCD2-201ENST00000308077 CYP27B1O15528 508 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 PHKG2P15735 406 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 TAF7Q15545 349 aaPredicted RBP8.96□□□□□ -0.97
PTCD2-201ENST00000308077 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.97
PTCD2-201ENST00000308077 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 SPG7Q9UQ90 795 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 TNNQ9UQP3 1299 aa8.96□□□□□ -0.97
PTCD2-201ENST00000308077 ALDH1L2Q3SY69 923 aa8.96□□□□□ -0.98
PTCD2-201ENST00000308077 FRAT1Q92837 279 aaPredicted RBP8.96□□□□□ -0.98
PTCD2-201ENST00000308077 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
PTCD2-201ENST00000308077 SLIT2O94813 1529 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 IL2RBP14784 551 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 BABAM1Q9NWV8 329 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 MRC1P22897 1456 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 IFNL2Q8IZJ0 200 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
PTCD2-201ENST00000308077 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
PTCD2-201ENST00000308077 TCERG1O14776 1098 aaKnown RBP8.94□□□□□ -0.98
PTCD2-201ENST00000308077 RLBP1P12271 317 aa8.94□□□□□ -0.98
PTCD2-201ENST00000308077 CANXP27824 592 aaKnown RBP8.94□□□□□ -0.98
PTCD2-201ENST00000308077 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
PTCD2-201ENST00000308077 TEFQ10587 303 aa8.94□□□□□ -0.98
PTCD2-201ENST00000308077 PRPF38BQ5VTL8 546 aaKnown RBP8.94□□□□□ -0.98
PTCD2-201ENST00000308077 ZCRB1Q8TBF4 217 aaKnown RBP8.94□□□□□ -0.98
PTCD2-201ENST00000308077 PANK1Q8TE04 598 aa8.94□□□□□ -0.98
PTCD2-201ENST00000308077 TOGARAM1Q9Y4F4 1720 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 KCNQ3O43525 872 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 PDE3AQ14432 1141 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 NOB1Q9ULX3 412 aaKnown RBP8.93□□□□□ -0.98
PTCD2-201ENST00000308077 RREB1Q92766 1687 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 TRIM27P14373 513 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 ZKSCAN2Q63HK3 967 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 ABHD8Q96I13 439 aa8.93□□□□□ -0.98
PTCD2-201ENST00000308077 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.93□□□□□ -0.98
PTCD2-201ENST00000308077 KIF16BQ96L93 1317 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 BTBD11A6QL63 1104 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 EIF4A1P60842 406 aaKnown RBP8.92□□□□□ -0.98
PTCD2-201ENST00000308077 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 DCAF5Q96JK2 942 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 EP400Q96L91 3159 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 EN1Q05925 392 aaPredicted RBP8.92□□□□□ -0.98
PTCD2-201ENST00000308077 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
PTCD2-201ENST00000308077 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
PTCD2-201ENST00000308077 SPATA31A1Q5TZJ5 1347 aa8.91□□□□□ -0.98
PTCD2-201ENST00000308077 C5P01031 1676 aa8.91□□□□□ -0.98
PTCD2-201ENST00000308077 ATF7IPQ6VMQ6 1270 aa8.91□□□□□ -0.98
PTCD2-201ENST00000308077 TNS1Q9HBL0 1735 aaKnown RBP8.91□□□□□ -0.98
PTCD2-201ENST00000308077 GLI3P10071 1580 aa8.91□□□□□ -0.98
PTCD2-201ENST00000308077 PAPPAQ13219 1627 aa8.9□□□□□ -0.98
PTCD2-201ENST00000308077 HSP90AB1P08238 724 aaKnown RBP8.9□□□□□ -0.98
PTCD2-201ENST00000308077 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms