RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 LTBP4Q8N2S1 1624 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
CDC40-201ENST00000307731 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
CDC40-201ENST00000307731 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 PANK1Q8TE04 598 aa9.36□□□□□ -0.91
CDC40-201ENST00000307731 EXOC6Q8TAG9 804 aa9.35□□□□□ -0.91
CDC40-201ENST00000307731 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
CDC40-201ENST00000307731 MSH5O43196 834 aa9.35□□□□□ -0.91
CDC40-201ENST00000307731 KRT24Q2M2I5 525 aa9.35□□□□□ -0.91
CDC40-201ENST00000307731 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
CDC40-201ENST00000307731 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
CDC40-201ENST00000307731 COL3A1P02461 1466 aaPredicted RBP9.35□□□□□ -0.91
CDC40-201ENST00000307731 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
CDC40-201ENST00000307731 STARD3NLO95772 234 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 THRAP3Q9Y2W1 955 aaKnown RBP9.34□□□□□ -0.91
CDC40-201ENST00000307731 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 KDRP35968 1356 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 ALDH1L2Q3SY69 923 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 ERICH6BQ5W0A0 696 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 CHL1O00533 1208 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 SNRPA1P09661 255 aaKnown RBP9.34□□□□□ -0.91
CDC40-201ENST00000307731 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
CDC40-201ENST00000307731 MED1Q15648 1581 aaPredicted RBP9.33□□□□□ -0.92
CDC40-201ENST00000307731 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
CDC40-201ENST00000307731 OS9Q13438 667 aaPredicted RBP9.33□□□□□ -0.92
CDC40-201ENST00000307731 SLIT3O75094 1523 aa9.33□□□□□ -0.92
CDC40-201ENST00000307731 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
CDC40-201ENST00000307731 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
CDC40-201ENST00000307731 HDAC5Q9UQL6 1122 aa9.33□□□□□ -0.92
CDC40-201ENST00000307731 CYP27B1O15528 508 aa9.33□□□□□ -0.92
CDC40-201ENST00000307731 GTF2E1P29083 439 aaPredicted RBP9.33□□□□□ -0.92
CDC40-201ENST00000307731 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
CDC40-201ENST00000307731 NFAT5O94916 1531 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 LTN1O94822 1766 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 KIF6Q6ZMV9 814 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 DBF4Q9UBU7 674 aaPredicted RBP9.32□□□□□ -0.92
CDC40-201ENST00000307731 ANXA1P04083 346 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 SMARCC1Q92922 1105 aaPredicted RBP9.32□□□□□ -0.92
CDC40-201ENST00000307731 BABAM1Q9NWV8 329 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 CHMP3Q9Y3E7 222 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 COL5A2P05997 1499 aaPredicted RBP9.32□□□□□ -0.92
CDC40-201ENST00000307731 VPS72Q15906 364 aa9.32□□□□□ -0.92
CDC40-201ENST00000307731 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 PDE3AQ14432 1141 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
CDC40-201ENST00000307731 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
CDC40-201ENST00000307731 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 VAMP4O75379 141 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 IQSEC2Q5JU85 1478 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 APBB1O00213 710 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 RXRBP28702 533 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 FBXO41Q8TF61 875 aa9.31□□□□□ -0.92
CDC40-201ENST00000307731 RWDD1Q9H446 243 aaPredicted RBP9.31□□□□□ -0.92
CDC40-201ENST00000307731 KCNQ3O43525 872 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 CHPF2Q9P2E5 772 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 NCAPD2Q15021 1401 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 SPATA31A5Q5VU36 1347 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 SPATA31A7Q8IWB4 1347 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 HMMRO75330 724 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 FLIIQ13045 1269 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 ZNF496Q96IT1 587 aaPredicted RBP9.3□□□□□ -0.92
CDC40-201ENST00000307731 HYPKQ9NX55 129 aa9.3□□□□□ -0.92
CDC40-201ENST00000307731 AHDC1Q5TGY3 1603 aaPredicted RBP9.3□□□□□ -0.92
CDC40-201ENST00000307731 XIRP1Q702N8 1843 aaKnown RBP9.29□□□□□ -0.92
CDC40-201ENST00000307731 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
CDC40-201ENST00000307731 RGS3P49796 1198 aa9.29□□□□□ -0.92
CDC40-201ENST00000307731 EIF4A1P60842 406 aaKnown RBP9.29□□□□□ -0.92
CDC40-201ENST00000307731 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
CDC40-201ENST00000307731 MEGF6O75095 1541 aa9.29□□□□□ -0.92
CDC40-201ENST00000307731 F6X3S4 739 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 CCT4P50991 539 aaKnown RBP9.28□□□□□ -0.92
CDC40-201ENST00000307731 PEAK1Q9H792 1746 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
CDC40-201ENST00000307731 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 UBTFL1P0CB47 393 aaPredicted RBP9.28□□□□□ -0.92
CDC40-201ENST00000307731 RBM6P78332 1123 aaKnown RBP9.28□□□□□ -0.92
CDC40-201ENST00000307731 TAF7LQ5H9L4 462 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 TMEM57Q8N5G2 664 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 TRIM27P14373 513 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 C20orf194Q5TEA3 1177 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
CDC40-201ENST00000307731 GNAI3P08754 354 aa9.27□□□□□ -0.92
CDC40-201ENST00000307731 HOXB7P09629 217 aa9.27□□□□□ -0.92
CDC40-201ENST00000307731 MVPQ14764 893 aaKnown RBP9.27□□□□□ -0.92
CDC40-201ENST00000307731 PTPRCP08575 1304 aa9.27□□□□□ -0.92
CDC40-201ENST00000307731 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.92
CDC40-201ENST00000307731 ALS2Q96Q42 1657 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 ZNF853P0CG23 659 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 MRPL50Q8N5N7 158 aaKnown RBP9.27□□□□□ -0.93
CDC40-201ENST00000307731 ZBTB3Q9H5J0 574 aa9.27□□□□□ -0.93
CDC40-201ENST00000307731 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms