RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 SDSP20132 328 aa6.46□□□□□ -1.38
USP8-201ENST00000307179 CDK11BP21127 795 aaKnown RBP6.46□□□□□ -1.38
USP8-201ENST00000307179 ZNF771Q7L3S4 317 aaPredicted RBP6.46□□□□□ -1.38
USP8-201ENST00000307179 ZNF397Q8NF99 534 aaPredicted RBP6.46□□□□□ -1.38
USP8-201ENST00000307179 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
USP8-201ENST00000307179 KRT222Q8N1A0 295 aa6.46□□□□□ -1.38
USP8-201ENST00000307179 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
USP8-201ENST00000307179 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.46□□□□□ -1.38
USP8-201ENST00000307179 MYH15Q9Y2K3 1946 aa6.46□□□□□ -1.38
USP8-201ENST00000307179 RIOK3O14730 519 aaKnown RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 CCDC192P0DO97 292 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 FUCA2Q9BTY2 467 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 CTNNA3Q9UI47 895 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 XRN1Q8IZH2 1706 aaKnown RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 CFAP65Q6ZU64 1925 aaKnown RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 A0A0U1RQG5 324 aaPredicted RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 BBXQ8WY36 941 aaPredicted RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 TIGD1Q96MW7 591 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 MLH3Q9UHC1 1453 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 SPATA31D1Q6ZQQ2 1576 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 HDGFL2Q7Z4V5 671 aaPredicted RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 ELP1O95163 1332 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 SIGLEC1Q9BZZ2 1709 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 GTF2E1P29083 439 aaPredicted RBP6.45□□□□□ -1.38
USP8-201ENST00000307179 PKP1Q13835 747 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 ESYT1Q9BSJ8 1104 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 FAM53CQ9NYF3 392 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 NPATQ14207 1427 aa6.45□□□□□ -1.38
USP8-201ENST00000307179 ZSCAN22P10073 491 aaPredicted RBP6.44□□□□□ -1.38
USP8-201ENST00000307179 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 LRRC37A3O60309 1634 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 RGPD1P0DJD0 1748 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 NEK4P51957 841 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 NCBP1Q09161 790 aaKnown RBP6.44□□□□□ -1.38
USP8-201ENST00000307179 TWISTNBQ3B726 338 aaPredicted RBP6.44□□□□□ -1.38
USP8-201ENST00000307179 CEP85Q6P2H3 762 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
USP8-201ENST00000307179 ZSCAN31Q96LW9 406 aaPredicted RBP6.44□□□□□ -1.38
USP8-201ENST00000307179 C3P01024 1663 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 NALCNQ8IZF0 1738 aa6.44□□□□□ -1.38
USP8-201ENST00000307179 ERCC6L2Q5T890 1561 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 CCDC112Q8NEF3 446 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 STAP2Q9UGK3 403 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 NSFL1CQ9UNZ2 370 aaKnown RBP6.43□□□□□ -1.38
USP8-201ENST00000307179 SALL3Q9BXA9 1300 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 EDC4Q6P2E9 1401 aaKnown RBP6.43□□□□□ -1.38
USP8-201ENST00000307179 TMEM131LA2VDJ0 1609 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 FMN2Q9NZ56 1722 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 HTATSF1O43719 755 aaKnown RBP6.43□□□□□ -1.38
USP8-201ENST00000307179 CCT4P50991 539 aaKnown RBP6.43□□□□□ -1.38
USP8-201ENST00000307179 KIF18AQ8NI77 898 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 SH2B1Q9NRF2 756 aaPredicted RBP6.43□□□□□ -1.38
USP8-201ENST00000307179 TMEM51Q9NW97 253 aa6.43□□□□□ -1.38
USP8-201ENST00000307179 SLFN14P0C7P3 912 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 TERF2Q15554 542 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 ERO1AQ96HE7 468 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 ATP8B1O43520 1251 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 F13A1P00488 732 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 PDE1AP54750 535 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 DDX19AQ9NUU7 478 aaKnown RBP6.42□□□□□ -1.38
USP8-201ENST00000307179 TRAK1Q9UPV9 953 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 MSH6P52701 1360 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 TULP2O00295 520 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 KCNJ6P48051 423 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 TDRD7Q8NHU6 1098 aaKnown RBP6.42□□□□□ -1.38
USP8-201ENST00000307179 KCNF1Q9H3M0 494 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
USP8-201ENST00000307179 U2AF2P26368 475 aaKnown RBP eCLIP6.42□□□□□ -1.382e-8■■■■□ 26
USP8-201ENST00000307179 CTR9Q6PD62 1173 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 SARM1Q6SZW1 724 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 RBM43Q6ZSC3 357 aaKnown RBP6.42□□□□□ -1.38
USP8-201ENST00000307179 MBIPQ9NS73 344 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 MYO5BQ9ULV0 1848 aa6.42□□□□□ -1.38
USP8-201ENST00000307179 RIMBP3CA6NJZ7 1639 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 RIMBP3BA6NNM3 1639 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 RIMBP3Q9UFD9 1639 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 KIF3BO15066 747 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 HSPA4P34932 840 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 CEP170BQ9Y4F5 1589 aaPredicted RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 FYB1O15117 783 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 CCP110O43303 1012 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 STX6O43752 255 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 HCLS1P14317 486 aaPredicted RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 PRKAR2BP31323 418 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 TPM1P09493 284 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 PDCP20941 246 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 RBM6P78332 1123 aaKnown RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 FBLN2P98095 1184 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 BMS1Q14692 1282 aaKnown RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 PLA2G4DQ86XP0 818 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 C1orf115Q9H7X2 142 aa6.41□□□□□ -1.38
USP8-201ENST00000307179 NAP1L2Q9ULW6 460 aaPredicted RBP6.41□□□□□ -1.38
USP8-201ENST00000307179 TEX35Q5T0J7 233 aa6.4□□□□□ -1.38
USP8-201ENST00000307179 TM6SF1Q9BZW5 370 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms