RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 IL17REQ8NFR9 667 aa8.98□□□□□ -0.97
RGPD3-201ENST00000304514 MRC1P22897 1456 aa8.98□□□□□ -0.97
RGPD3-201ENST00000304514 NPHP4O75161 1426 aaPredicted RBP8.98□□□□□ -0.97
RGPD3-201ENST00000304514 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
RGPD3-201ENST00000304514 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
RGPD3-201ENST00000304514 SMARCA5O60264 1052 aaPredicted RBP8.97□□□□□ -0.97
RGPD3-201ENST00000304514 AMPHP49418 695 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 RAB3GAP1Q15042 981 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 BRPF3Q9ULD4 1205 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 IBTKQ9P2D0 1353 aaPredicted RBP8.97□□□□□ -0.97
RGPD3-201ENST00000304514 SOX12O15370 315 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 FSD2A1L4K1 749 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 MCM4P33991 863 aa8.97□□□□□ -0.97
RGPD3-201ENST00000304514 RTF1Q92541 710 aaKnown RBP8.97□□□□□ -0.97
RGPD3-201ENST00000304514 TJP1Q07157 1748 aa8.96□□□□□ -0.97
RGPD3-201ENST00000304514 IP6K1Q92551 441 aa8.96□□□□□ -0.97
RGPD3-201ENST00000304514 F6X3S4 739 aa8.96□□□□□ -0.97
RGPD3-201ENST00000304514 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.97
RGPD3-201ENST00000304514 NLRP6P59044 892 aa8.96□□□□□ -0.97
RGPD3-201ENST00000304514 SDSP20132 328 aa8.96□□□□□ -0.98
RGPD3-201ENST00000304514 HEG1Q9ULI3 1381 aa8.96□□□□□ -0.98
RGPD3-201ENST00000304514 CLEC17AQ6ZS10 378 aa8.96□□□□□ -0.98
RGPD3-201ENST00000304514 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
RGPD3-201ENST00000304514 CIZ1Q9ULV3 898 aaPredicted RBP8.95□□□□□ -0.98
RGPD3-201ENST00000304514 FLIIQ13045 1269 aa8.95□□□□□ -0.98
RGPD3-201ENST00000304514 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
RGPD3-201ENST00000304514 NUTM2GQ5VZR2 741 aa8.95□□□□□ -0.98
RGPD3-201ENST00000304514 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
RGPD3-201ENST00000304514 RBM42Q9BTD8 480 aaKnown RBP8.95□□□□□ -0.98
RGPD3-201ENST00000304514 TNPO1Q92973 898 aaKnown RBP8.95□□□□□ -0.98
RGPD3-201ENST00000304514 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
RGPD3-201ENST00000304514 SETD1BQ9UPS6 1966 aaKnown RBP8.94□□□□□ -0.98
RGPD3-201ENST00000304514 TAF7Q15545 349 aaPredicted RBP8.94□□□□□ -0.98
RGPD3-201ENST00000304514 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
RGPD3-201ENST00000304514 GNAI2P04899 355 aa8.94□□□□□ -0.98
RGPD3-201ENST00000304514 NBPF6Q5VWK0 638 aa8.94□□□□□ -0.98
RGPD3-201ENST00000304514 USHBP1Q8N6Y0 703 aa8.94□□□□□ -0.98
RGPD3-201ENST00000304514 NBPF4Q96M43 638 aa8.94□□□□□ -0.98
RGPD3-201ENST00000304514 ATP8B2P98198 1209 aa8.94□□□□□ -0.98
RGPD3-201ENST00000304514 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
RGPD3-201ENST00000304514 PNMA6EA0A0J9YXQ4 647 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 AOX1Q06278 1338 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 DDX11L8A8MPP1 907 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 PDE1AP54750 535 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 POLA2Q14181 598 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 ADCY9O60503 1353 aa8.93□□□□□ -0.98
RGPD3-201ENST00000304514 EIF4A1P60842 406 aaKnown RBP8.92□□□□□ -0.98
RGPD3-201ENST00000304514 RABEP1Q15276 862 aa8.92□□□□□ -0.98
RGPD3-201ENST00000304514 STAP2Q9UGK3 403 aa8.92□□□□□ -0.98
RGPD3-201ENST00000304514 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
RGPD3-201ENST00000304514 C1orf167Q5SNV9 1468 aa8.92□□□□□ -0.98
RGPD3-201ENST00000304514 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
RGPD3-201ENST00000304514 HSP90AB1P08238 724 aaKnown RBP8.91□□□□□ -0.98
RGPD3-201ENST00000304514 WNK3Q9BYP7 1800 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 TRAK2O60296 914 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 HMMRO75330 724 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 PLPPR3Q6T4P5 718 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 HOXB7P09629 217 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 TOGARAM1Q9Y4F4 1720 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 STK31Q9BXU1 1019 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 USP44Q9H0E7 712 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 PHAXQ9H814 394 aaKnown RBP8.91□□□□□ -0.98
RGPD3-201ENST00000304514 LGR6Q9HBX8 967 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 SLC4A10Q6U841 1118 aa8.91□□□□□ -0.98
RGPD3-201ENST00000304514 AKAP4Q5JQC9 854 aa8.9□□□□□ -0.98
RGPD3-201ENST00000304514 LRRCC1Q9C099 1032 aa8.9□□□□□ -0.98
RGPD3-201ENST00000304514 KDM6AO15550 1401 aaPredicted RBP8.9□□□□□ -0.98
RGPD3-201ENST00000304514 KCNH5Q8NCM2 988 aa8.9□□□□□ -0.98
RGPD3-201ENST00000304514 LRRFIP2Q9Y608 721 aaKnown RBP8.9□□□□□ -0.98
RGPD3-201ENST00000304514 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
RGPD3-201ENST00000304514 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
RGPD3-201ENST00000304514 SSH3Q8TE77 659 aa8.9□□□□□ -0.98
RGPD3-201ENST00000304514 GNAI3P08754 354 aa8.9□□□□□ -0.99
RGPD3-201ENST00000304514 L1TD1Q5T7N2 865 aaKnown RBP8.9□□□□□ -0.99
RGPD3-201ENST00000304514 DDX60Q8IY21 1712 aaKnown RBP8.9□□□□□ -0.99
RGPD3-201ENST00000304514 BEND3Q5T5X7 828 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 DCCP43146 1447 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 ERC2O15083 957 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 MX1P20591 662 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
RGPD3-201ENST00000304514 CASC1Q6TDU7 716 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 ARHGEF25Q86VW2 580 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 KCNQ3O43525 872 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 MYH15Q9Y2K3 1946 aa8.89□□□□□ -0.99
RGPD3-201ENST00000304514 MEGF6O75095 1541 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 XRCC6P12956 609 aaKnown RBP eCLIP8.88□□□□□ -0.99
RGPD3-201ENST00000304514 SSFA2P28290 1259 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 NECTIN2Q92692 538 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
RGPD3-201ENST00000304514 ESYT1Q9BSJ8 1104 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 EXOC6BQ9Y2D4 811 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 LTV1Q96GA3 475 aaPredicted RBP8.88□□□□□ -0.99
RGPD3-201ENST00000304514 CHPF2Q9P2E5 772 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 LAMA4Q16363 1823 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 RNMTO43148 476 aaKnown RBP8.88□□□□□ -0.99
RGPD3-201ENST00000304514 TSHZ3Q63HK5 1081 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 PI4K2BQ8TCG2 481 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 STRCQ7RTU9 1775 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 RBM33Q96EV2 1170 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms