RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 NOB1Q9ULX3 412 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-201ENST00000302763 THSD7AQ9UPZ6 1657 aa9.53□□□□□ -0.88
CTNNA1-201ENST00000302763 NPHP3Q7Z494 1330 aa9.53□□□□□ -0.88
CTNNA1-201ENST00000302763 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-201ENST00000302763 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
CTNNA1-201ENST00000302763 ATF7IPQ6VMQ6 1270 aa9.52□□□□□ -0.88
CTNNA1-201ENST00000302763 APBB1O00213 710 aa9.52□□□□□ -0.89
CTNNA1-201ENST00000302763 GNAI1P63096 354 aa9.52□□□□□ -0.89
CTNNA1-201ENST00000302763 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-201ENST00000302763 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-201ENST00000302763 ANKRD36CQ5JPF3 1778 aa9.52□□□□□ -0.89
CTNNA1-201ENST00000302763 IPO9Q96P70 1041 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-201ENST00000302763 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
CTNNA1-201ENST00000302763 BABAM1Q9NWV8 329 aa9.51□□□□□ -0.89
CTNNA1-201ENST00000302763 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
CTNNA1-201ENST00000302763 SBF2Q86WG5 1849 aa9.51□□□□□ -0.89
CTNNA1-201ENST00000302763 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
CTNNA1-201ENST00000302763 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
CTNNA1-201ENST00000302763 BECN1Q14457 450 aa9.5□□□□□ -0.89
CTNNA1-201ENST00000302763 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
CTNNA1-201ENST00000302763 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
CTNNA1-201ENST00000302763 AMPHP49418 695 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 GZF1Q9H116 711 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 GNAT3A8MTJ3 354 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 PDE4AP27815 886 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 MIS18AQ9NYP9 233 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 SLIT2O94813 1529 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 MSH5O43196 834 aa9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 INTS3Q68E01 1043 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-201ENST00000302763 KCNQ3O43525 872 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 BCORQ6W2J9 1755 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 PDIA6Q15084 440 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 ATF3P18847 181 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 AAMPQ13685 434 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 G2E3Q7L622 706 aa9.48□□□□□ -0.89
CTNNA1-201ENST00000302763 A0A1B0GUL6 1792 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 CYP27B1O15528 508 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 ZKSCAN2Q63HK3 967 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 ELL2O00472 640 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 TCERG1O14776 1098 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 AKAP4Q5JQC9 854 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 DZIP1LQ8IYY4 767 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 KIF16BQ96L93 1317 aa9.47□□□□□ -0.89
CTNNA1-201ENST00000302763 ADCY9O60503 1353 aa9.46□□□□□ -0.89
CTNNA1-201ENST00000302763 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.89
CTNNA1-201ENST00000302763 SMC5Q8IY18 1101 aa9.46□□□□□ -0.89
CTNNA1-201ENST00000302763 WDR17Q8IZU2 1322 aa9.46□□□□□ -0.89
CTNNA1-201ENST00000302763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.892e-8■□□□□ 11.2
CTNNA1-201ENST00000302763 LY75O60449 1722 aa9.46□□□□□ -0.9
CTNNA1-201ENST00000302763 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-201ENST00000302763 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-201ENST00000302763 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
CTNNA1-201ENST00000302763 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.9
CTNNA1-201ENST00000302763 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 LAMB2P55268 1798 aa9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 CALD1Q05682 793 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 PHKG2P15735 406 aa9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 ANP32BQ92688 251 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-201ENST00000302763 PRAMEF22A3QJZ6 481 aa9.44□□□□□ -0.9
CTNNA1-201ENST00000302763 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-201ENST00000302763 MS4A1P11836 297 aa9.44□□□□□ -0.9
CTNNA1-201ENST00000302763 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
CTNNA1-201ENST00000302763 SALL3Q9BXA9 1300 aa9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 ZC3H6P61129 1189 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 PTPRCP08575 1304 aa9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 NHSQ6T4R5 1651 aa9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 TAF7Q15545 349 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 DDX60Q8IY21 1712 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 NUP98P52948 1817 aa9.43□□□□□ -0.9
CTNNA1-201ENST00000302763 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 BCL9LQ86UU0 1499 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 A0A0G2JS52 829 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 HOXB7P09629 217 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 LTV1Q96GA3 475 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 AMOTQ4VCS5 1084 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
CTNNA1-201ENST00000302763 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-201ENST00000302763 COL4A1P02462 1669 aa9.41□□□□□ -0.9
CTNNA1-201ENST00000302763 LRP5O75197 1615 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 AK9Q5TCS8 1911 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 PROSER3Q2NL68 480 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 BRWD3Q6RI45 1802 aa9.4□□□□□ -0.9
CTNNA1-201ENST00000302763 MYH3P11055 1940 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms