RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 TUBGCP6Q96RT7 1819 aa24.66■■□□□ 1.54
TMEM88-201ENST00000301599 ITPK1Q13572 414 aa24.66■■□□□ 1.54
TMEM88-201ENST00000301599 MSL1Q68DK7 614 aa24.66■■□□□ 1.54
TMEM88-201ENST00000301599 RBM42Q9BTD8 480 aaKnown RBP24.66■■□□□ 1.54
TMEM88-201ENST00000301599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.65■■□□□ 1.54
TMEM88-201ENST00000301599 SSFA2P28290 1259 aa24.65■■□□□ 1.54
TMEM88-201ENST00000301599 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.54
TMEM88-201ENST00000301599 PHF14O94880 888 aa24.64■■□□□ 1.54
TMEM88-201ENST00000301599 HMOX1P09601 288 aa24.64■■□□□ 1.54
TMEM88-201ENST00000301599 AKAP4Q5JQC9 854 aa24.64■■□□□ 1.54
TMEM88-201ENST00000301599 NFATC2IPQ8NCF5 419 aa24.64■■□□□ 1.54
TMEM88-201ENST00000301599 C4BP0C0L5 1744 aa24.63■■□□□ 1.53
TMEM88-201ENST00000301599 KDM6AO15550 1401 aaPredicted RBP24.62■■□□□ 1.53
TMEM88-201ENST00000301599 COL24A1Q17RW2 1714 aa24.62■■□□□ 1.53
TMEM88-201ENST00000301599 GNPATO15228 680 aa24.62■■□□□ 1.53
TMEM88-201ENST00000301599 GPR162Q16538 588 aa24.62■■□□□ 1.53
TMEM88-201ENST00000301599 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
TMEM88-201ENST00000301599 SMIM5Q71RC9 77 aa24.61■■□□□ 1.53
TMEM88-201ENST00000301599 SLC4A9Q96Q91 983 aa24.61■■□□□ 1.53
TMEM88-201ENST00000301599 RC3H1Q5TC82 1133 aaKnown RBP24.6■■□□□ 1.53
TMEM88-201ENST00000301599 TRAPPC3LQ5T215 181 aa24.58■■□□□ 1.53
TMEM88-201ENST00000301599 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.53
TMEM88-201ENST00000301599 PTCD1O75127 700 aaKnown RBP24.57■■□□□ 1.52
TMEM88-201ENST00000301599 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
TMEM88-201ENST00000301599 NLGN2Q8NFZ4 835 aa24.57■■□□□ 1.52
TMEM88-201ENST00000301599 LGR6Q9HBX8 967 aa24.57■■□□□ 1.52
TMEM88-201ENST00000301599 CD2APQ9Y5K6 639 aa24.57■■□□□ 1.52
TMEM88-201ENST00000301599 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
TMEM88-201ENST00000301599 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
TMEM88-201ENST00000301599 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
TMEM88-201ENST00000301599 CFAP53Q96M91 514 aa24.55■■□□□ 1.52
TMEM88-201ENST00000301599 SLC52A2Q9HAB3 445 aa24.55■■□□□ 1.52
TMEM88-201ENST00000301599 RPS6KA4O75676 772 aa24.54■■□□□ 1.52
TMEM88-201ENST00000301599 ADRA2BP18089 450 aa24.53■■□□□ 1.52
TMEM88-201ENST00000301599 CNTNAP4Q9C0A0 1308 aa24.53■■□□□ 1.52
TMEM88-201ENST00000301599 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
TMEM88-201ENST00000301599 NLGN1Q8N2Q7 840 aa24.51■■□□□ 1.51
TMEM88-201ENST00000301599 ARHGEF1Q92888 912 aaKnown RBP24.51■■□□□ 1.51
TMEM88-201ENST00000301599 GRIN3BO60391 1043 aa24.5■■□□□ 1.51
TMEM88-201ENST00000301599 NUDCQ9Y266 331 aa24.5■■□□□ 1.51
TMEM88-201ENST00000301599 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
TMEM88-201ENST00000301599 RFC4P35249 363 aa24.49■■□□□ 1.51
TMEM88-201ENST00000301599 CRKLP46109 303 aaKnown RBP24.48■■□□□ 1.51
TMEM88-201ENST00000301599 COL3A1P02461 1466 aaPredicted RBP24.47■■□□□ 1.51
TMEM88-201ENST00000301599 PPP2R1AP30153 589 aa24.47■■□□□ 1.51
TMEM88-201ENST00000301599 GAS2L2Q8NHY3 880 aa24.47■■□□□ 1.51
TMEM88-201ENST00000301599 GNAT3A8MTJ3 354 aa24.46■■□□□ 1.51
TMEM88-201ENST00000301599 SCN11AQ9UI33 1791 aa24.46■■□□□ 1.51
TMEM88-201ENST00000301599 MMP10P09238 476 aa24.45■■□□□ 1.5
TMEM88-201ENST00000301599 SLC39A6Q13433 755 aa24.45■■□□□ 1.5
TMEM88-201ENST00000301599 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.5
TMEM88-201ENST00000301599 INTS5Q6P9B9 1019 aaKnown RBP24.43■■□□□ 1.5
TMEM88-201ENST00000301599 DNAJC10Q8IXB1 793 aa24.43■■□□□ 1.5
TMEM88-201ENST00000301599 ZNF784Q8NCA9 323 aaPredicted RBP24.43■■□□□ 1.5
TMEM88-201ENST00000301599 GYS1P13807 737 aa24.42■■□□□ 1.5
TMEM88-201ENST00000301599 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
TMEM88-201ENST00000301599 U2AF1L5P0DN76 240 aaPredicted RBP24.41■■□□□ 1.5
TMEM88-201ENST00000301599 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
TMEM88-201ENST00000301599 U2AF1Q01081 240 aaKnown RBP eCLIP24.41■■□□□ 1.5
TMEM88-201ENST00000301599 TEFQ10587 303 aa24.41■■□□□ 1.5
TMEM88-201ENST00000301599 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
TMEM88-201ENST00000301599 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
TMEM88-201ENST00000301599 CYP19A1P11511 503 aaPredicted RBP24.4■■□□□ 1.5
TMEM88-201ENST00000301599 TTC5Q8N0Z6 440 aa24.4■■□□□ 1.5
TMEM88-201ENST00000301599 PHACTR3Q96KR7 559 aa24.4■■□□□ 1.5
TMEM88-201ENST00000301599 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
TMEM88-201ENST00000301599 UTRNP46939 3433 aa24.4■■□□□ 1.5
TMEM88-201ENST00000301599 COL5A3P25940 1745 aaPredicted RBP24.39■■□□□ 1.5
TMEM88-201ENST00000301599 FCHSD2O94868 740 aa24.39■■□□□ 1.49
TMEM88-201ENST00000301599 PARP3Q9Y6F1 533 aa24.39■■□□□ 1.49
TMEM88-201ENST00000301599 CHD4Q14839 1912 aa24.39■■□□□ 1.49
TMEM88-201ENST00000301599 MRC1P22897 1456 aa24.38■■□□□ 1.49
TMEM88-201ENST00000301599 MYH14Q7Z406 1995 aaKnown RBP24.38■■□□□ 1.49
TMEM88-201ENST00000301599 TGFB2P61812 414 aa24.36■■□□□ 1.49
TMEM88-201ENST00000301599 SRP68Q9UHB9 627 aaKnown RBP24.36■■□□□ 1.49
TMEM88-201ENST00000301599 ZPR1O75312 459 aa24.35■■□□□ 1.49
TMEM88-201ENST00000301599 USP42Q9H9J4 1324 aaKnown RBP24.35■■□□□ 1.49
TMEM88-201ENST00000301599 ADAMTS7Q9UKP4 1686 aa24.34■■□□□ 1.49
TMEM88-201ENST00000301599 STARD3NLO95772 234 aa24.34■■□□□ 1.49
TMEM88-201ENST00000301599 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
TMEM88-201ENST00000301599 TEX13AQ9BXU3 409 aaPredicted RBP24.34■■□□□ 1.49
TMEM88-201ENST00000301599 FKBP8Q14318 412 aa24.33■■□□□ 1.49
TMEM88-201ENST00000301599 SOS1Q07889 1333 aaPredicted RBP24.33■■□□□ 1.48
TMEM88-201ENST00000301599 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
TMEM88-201ENST00000301599 TJP1Q07157 1748 aa24.32■■□□□ 1.48
TMEM88-201ENST00000301599 CICQ96RK0 1608 aaPredicted RBP24.32■■□□□ 1.48
TMEM88-201ENST00000301599 KCPQ6ZWJ8 1503 aa24.31■■□□□ 1.48
TMEM88-201ENST00000301599 ZNF496Q96IT1 587 aaPredicted RBP24.31■■□□□ 1.48
TMEM88-201ENST00000301599 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 TM4SF1P30408 202 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 USPL1Q5W0Q7 1092 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 WWC3Q9ULE0 1092 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
TMEM88-201ENST00000301599 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
TMEM88-201ENST00000301599 HTATSF1O43719 755 aaKnown RBP24.29■■□□□ 1.48
TMEM88-201ENST00000301599 CANXP27824 592 aaKnown RBP24.29■■□□□ 1.48
TMEM88-201ENST00000301599 FMNL2Q96PY5 1086 aa24.29■■□□□ 1.48
TMEM88-201ENST00000301599 NEFMP07197 916 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms