RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
TTC39B-201ENST00000297615 GNAI2P04899 355 aa16.68■□□□□ 0.26
TTC39B-201ENST00000297615 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
TTC39B-201ENST00000297615 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
TTC39B-201ENST00000297615 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
TTC39B-201ENST00000297615 PKP1Q13835 747 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 C1orf141Q5JVX7 400 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 CDC42BPGQ6DT37 1551 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
TTC39B-201ENST00000297615 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 CDC45O75419 566 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 RTL1A6NKG5 1358 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
TTC39B-201ENST00000297615 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 XRCC6P12956 609 aaKnown RBP eCLIP16.66■□□□□ 0.26
TTC39B-201ENST00000297615 SSFA2P28290 1259 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
TTC39B-201ENST00000297615 CHMP4BQ9H444 224 aaKnown RBP16.66■□□□□ 0.26
TTC39B-201ENST00000297615 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
TTC39B-201ENST00000297615 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
TTC39B-201ENST00000297615 KIF2CQ99661 725 aa16.65■□□□□ 0.26
TTC39B-201ENST00000297615 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
TTC39B-201ENST00000297615 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
TTC39B-201ENST00000297615 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
TTC39B-201ENST00000297615 ZGPATQ8N5A5 531 aaKnown RBP16.64■□□□□ 0.25
TTC39B-201ENST00000297615 CRB1P82279 1406 aa16.64■□□□□ 0.25
TTC39B-201ENST00000297615 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
TTC39B-201ENST00000297615 RBM25P49756 843 aaKnown RBP16.63■□□□□ 0.25
TTC39B-201ENST00000297615 IP6K1Q92551 441 aa16.63■□□□□ 0.25
TTC39B-201ENST00000297615 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
TTC39B-201ENST00000297615 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
TTC39B-201ENST00000297615 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
TTC39B-201ENST00000297615 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
TTC39B-201ENST00000297615 HMMRO75330 724 aa16.62■□□□□ 0.25
TTC39B-201ENST00000297615 CPA1P15085 419 aa16.62■□□□□ 0.25
TTC39B-201ENST00000297615 ATF3P18847 181 aa16.62■□□□□ 0.25
TTC39B-201ENST00000297615 PDE1AP54750 535 aa16.62■□□□□ 0.25
TTC39B-201ENST00000297615 ATP5J2-PTCD1G3V325 749 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
TTC39B-201ENST00000297615 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
TTC39B-201ENST00000297615 IL25Q9H293 177 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 NEK4P51957 841 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 MAP3K2Q9Y2U5 619 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
TTC39B-201ENST00000297615 UBR1Q8IWV7 1749 aa16.6■□□□□ 0.25
TTC39B-201ENST00000297615 TECPR2O15040 1411 aa16.6■□□□□ 0.25
TTC39B-201ENST00000297615 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
TTC39B-201ENST00000297615 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
TTC39B-201ENST00000297615 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
TTC39B-201ENST00000297615 MAP3K5Q99683 1374 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
TTC39B-201ENST00000297615 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
TTC39B-201ENST00000297615 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 PLEKHO1Q53GL0 409 aaPredicted RBP16.59■□□□□ 0.25
TTC39B-201ENST00000297615 MCTP1Q6DN14 999 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 RAPGEF4Q8WZA2 1011 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 GBP4Q96PP9 640 aa16.59■□□□□ 0.25
TTC39B-201ENST00000297615 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
TTC39B-201ENST00000297615 AK9Q5TCS8 1911 aa16.58■□□□□ 0.25
TTC39B-201ENST00000297615 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.25
TTC39B-201ENST00000297615 CWC27Q6UX04 472 aaKnown RBP16.58■□□□□ 0.24
TTC39B-201ENST00000297615 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.24
TTC39B-201ENST00000297615 USP31Q70CQ4 1352 aa16.58■□□□□ 0.24
TTC39B-201ENST00000297615 PTPRCP08575 1304 aa16.58■□□□□ 0.24
TTC39B-201ENST00000297615 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
TTC39B-201ENST00000297615 MX1P20591 662 aa16.57■□□□□ 0.24
TTC39B-201ENST00000297615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
TTC39B-201ENST00000297615 RGS12O14924 1447 aa16.57■□□□□ 0.24
TTC39B-201ENST00000297615 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
TTC39B-201ENST00000297615 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
TTC39B-201ENST00000297615 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 USP26Q9BXU7 913 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 DIP2AQ14689 1571 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 CHGBP05060 677 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
TTC39B-201ENST00000297615 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
TTC39B-201ENST00000297615 RNMTO43148 476 aaKnown RBP16.55■□□□□ 0.24
TTC39B-201ENST00000297615 GNAI3P08754 354 aa16.55■□□□□ 0.24
TTC39B-201ENST00000297615 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
TTC39B-201ENST00000297615 ARHGEF10O15013 1369 aa16.55■□□□□ 0.24
TTC39B-201ENST00000297615 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
TTC39B-201ENST00000297615 ARHGEF25Q86VW2 580 aa16.54■□□□□ 0.24
TTC39B-201ENST00000297615 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms