RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
CAGE1-201ENST00000296742 ZSCAN23Q3MJ62 389 aa15.31■□□□□ 0.04
CAGE1-201ENST00000296742 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
CAGE1-201ENST00000296742 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
CAGE1-201ENST00000296742 IGSF1Q8N6C5 1336 aa15.31■□□□□ 0.04
CAGE1-201ENST00000296742 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
CAGE1-201ENST00000296742 ZNF500O60304 480 aaPredicted RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 SIRT2Q8IXJ6 389 aa15.3■□□□□ 0.04
CAGE1-201ENST00000296742 SMAP1Q8IYB5 467 aaPredicted RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 IBTKQ9P2D0 1353 aaPredicted RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 ANKRD45Q5TZF3 282 aa15.3■□□□□ 0.04
CAGE1-201ENST00000296742 ARHGEF10O15013 1369 aa15.3■□□□□ 0.04
CAGE1-201ENST00000296742 F6X3S4 739 aa15.3■□□□□ 0.04
CAGE1-201ENST00000296742 BRPF1P55201 1214 aaPredicted RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 G2E3Q7L622 706 aa15.3■□□□□ 0.04
CAGE1-201ENST00000296742 PROSER2Q86WR7 435 aaPredicted RBP15.3■□□□□ 0.04
CAGE1-201ENST00000296742 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
CAGE1-201ENST00000296742 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
CAGE1-201ENST00000296742 HS1BP3Q53T59 392 aa15.29■□□□□ 0.04
CAGE1-201ENST00000296742 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
CAGE1-201ENST00000296742 DYNC1I1O14576 645 aa15.29■□□□□ 0.04
CAGE1-201ENST00000296742 ZNF445P59923 1031 aa15.29■□□□□ 0.04
CAGE1-201ENST00000296742 ABCC4O15439 1325 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 APBB1O00213 710 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 NBPF6Q5VWK0 638 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 NBPF4Q96M43 638 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 ZKSCAN5Q9Y2L8 839 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 CRB1P82279 1406 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 MTERF4Q7Z6M4 381 aaKnown RBP15.28■□□□□ 0.04
CAGE1-201ENST00000296742 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 FMN2Q9NZ56 1722 aa15.28■□□□□ 0.04
CAGE1-201ENST00000296742 CHD2O14647 1828 aaKnown RBP15.27■□□□□ 0.04
CAGE1-201ENST00000296742 NUCB1Q02818 461 aa15.27■□□□□ 0.04
CAGE1-201ENST00000296742 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
CAGE1-201ENST00000296742 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
CAGE1-201ENST00000296742 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.03
CAGE1-201ENST00000296742 RBM27Q9P2N5 1060 aaKnown RBP15.27■□□□□ 0.03
CAGE1-201ENST00000296742 KDRP35968 1356 aa15.27■□□□□ 0.03
CAGE1-201ENST00000296742 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.03
CAGE1-201ENST00000296742 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
CAGE1-201ENST00000296742 CSPP1Q1MSJ5 1256 aa15.26■□□□□ 0.03
CAGE1-201ENST00000296742 PDLIM2Q96JY6 352 aa15.26■□□□□ 0.03
CAGE1-201ENST00000296742 HSPA2P54652 639 aa15.25■□□□□ 0.03
CAGE1-201ENST00000296742 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
CAGE1-201ENST00000296742 TBC1D9Q6ZT07 1266 aa15.25■□□□□ 0.03
CAGE1-201ENST00000296742 PKP1Q13835 747 aa15.25■□□□□ 0.03
CAGE1-201ENST00000296742 SASS6Q6UVJ0 657 aa15.25■□□□□ 0.03
CAGE1-201ENST00000296742 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
CAGE1-201ENST00000296742 MEIS3Q99687 375 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 LMBRD1Q9NUN5 540 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 AK9Q5TCS8 1911 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 GCP02774 474 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 ADAMTSL3P82987 1691 aa15.24■□□□□ 0.03
CAGE1-201ENST00000296742 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
CAGE1-201ENST00000296742 DNTTIP2Q5QJE6 756 aaKnown RBP15.23■□□□□ 0.03
CAGE1-201ENST00000296742 IP6K1Q92551 441 aa15.23■□□□□ 0.03
CAGE1-201ENST00000296742 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
CAGE1-201ENST00000296742 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
CAGE1-201ENST00000296742 SYCE3A1L190 88 aa15.22■□□□□ 0.03
CAGE1-201ENST00000296742 PTMAP06454 111 aaKnown RBP15.22■□□□□ 0.03
CAGE1-201ENST00000296742 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
CAGE1-201ENST00000296742 MSH6P52701 1360 aa15.22■□□□□ 0.03
CAGE1-201ENST00000296742 NUCB2P80303 420 aa15.21■□□□□ 0.03
CAGE1-201ENST00000296742 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
CAGE1-201ENST00000296742 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.03
CAGE1-201ENST00000296742 TSC1Q92574 1164 aa15.21■□□□□ 0.03
CAGE1-201ENST00000296742 CHAMP1Q96JM3 812 aa15.21■□□□□ 0.03
CAGE1-201ENST00000296742 CCDC94Q9BW85 323 aaPredicted RBP15.21■□□□□ 0.03
CAGE1-201ENST00000296742 CCDC39Q9UFE4 941 aa15.21■□□□□ 0.03
CAGE1-201ENST00000296742 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.02
CAGE1-201ENST00000296742 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.02
CAGE1-201ENST00000296742 RGS12O14924 1447 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
CAGE1-201ENST00000296742 GPT2Q8TD30 523 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 CABLES1Q8TDN4 633 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 KCNQ3O43525 872 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
CAGE1-201ENST00000296742 MPNDQ8N594 471 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
CAGE1-201ENST00000296742 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
CAGE1-201ENST00000296742 MCM5P33992 734 aa15.19■□□□□ 0.02
CAGE1-201ENST00000296742 DMTNQ08495 405 aa15.19■□□□□ 0.02
CAGE1-201ENST00000296742 MAP3K5Q99683 1374 aa15.19■□□□□ 0.02
CAGE1-201ENST00000296742 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
CAGE1-201ENST00000296742 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
CAGE1-201ENST00000296742 STK31Q9BXU1 1019 aa15.19■□□□□ 0.02
CAGE1-201ENST00000296742 TAF7Q15545 349 aaPredicted RBP15.18■□□□□ 0.02
CAGE1-201ENST00000296742 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
CAGE1-201ENST00000296742 ZNF142P52746 1687 aaPredicted RBP15.18■□□□□ 0.02
CAGE1-201ENST00000296742 LTN1O94822 1766 aa15.18■□□□□ 0.02
CAGE1-201ENST00000296742 ANXA1P04083 346 aa15.18■□□□□ 0.02
CAGE1-201ENST00000296742 ZSCAN20P17040 1043 aaPredicted RBP15.18■□□□□ 0.02
CAGE1-201ENST00000296742 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms