RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 NUTM2AQ8IVF1 878 aaPredicted RBP18.44■□□□□ 0.54
TTC9C-201ENST00000294161 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 RGS12O14924 1447 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 HMMRO75330 724 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
TTC9C-201ENST00000294161 CHRNA2Q15822 529 aa18.43■□□□□ 0.54
TTC9C-201ENST00000294161 SIRT2Q8IXJ6 389 aa18.43■□□□□ 0.54
TTC9C-201ENST00000294161 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
TTC9C-201ENST00000294161 COL22A1Q8NFW1 1626 aaPredicted RBP18.43■□□□□ 0.54
TTC9C-201ENST00000294161 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
TTC9C-201ENST00000294161 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
TTC9C-201ENST00000294161 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
TTC9C-201ENST00000294161 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
TTC9C-201ENST00000294161 DEKP35659 375 aaKnown RBP18.39■□□□□ 0.54
TTC9C-201ENST00000294161 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.54
TTC9C-201ENST00000294161 IL17REQ8NFR9 667 aa18.39■□□□□ 0.54
TTC9C-201ENST00000294161 CEP85Q6P2H3 762 aa18.39■□□□□ 0.53
TTC9C-201ENST00000294161 JCADQ9P266 1359 aa18.39■□□□□ 0.53
TTC9C-201ENST00000294161 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
TTC9C-201ENST00000294161 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
TTC9C-201ENST00000294161 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
TTC9C-201ENST00000294161 GNAI3P08754 354 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 HOXB7P09629 217 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 ATP10DQ9P241 1426 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
TTC9C-201ENST00000294161 LRP6O75581 1613 aa18.36■□□□□ 0.53
TTC9C-201ENST00000294161 FLIIQ13045 1269 aa18.36■□□□□ 0.53
TTC9C-201ENST00000294161 NFKBIBQ15653 356 aa18.36■□□□□ 0.53
TTC9C-201ENST00000294161 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
TTC9C-201ENST00000294161 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
TTC9C-201ENST00000294161 GNAI2P04899 355 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
TTC9C-201ENST00000294161 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 COL18A1P39060 1754 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 CDC45O75419 566 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
TTC9C-201ENST00000294161 MEIS3Q99687 375 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
TTC9C-201ENST00000294161 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
TTC9C-201ENST00000294161 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
TTC9C-201ENST00000294161 G2E3Q7L622 706 aa18.34■□□□□ 0.53
TTC9C-201ENST00000294161 OVOS2A0A0G2JMS6 1433 aa18.33■□□□□ 0.53
TTC9C-201ENST00000294161 TEFQ10587 303 aa18.33■□□□□ 0.53
TTC9C-201ENST00000294161 C1orf141Q5JVX7 400 aa18.33■□□□□ 0.53
TTC9C-201ENST00000294161 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.53
TTC9C-201ENST00000294161 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
TTC9C-201ENST00000294161 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
TTC9C-201ENST00000294161 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
TTC9C-201ENST00000294161 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
TTC9C-201ENST00000294161 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
TTC9C-201ENST00000294161 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
TTC9C-201ENST00000294161 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
TTC9C-201ENST00000294161 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
TTC9C-201ENST00000294161 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
TTC9C-201ENST00000294161 CPDO75976 1380 aa18.31■□□□□ 0.52
TTC9C-201ENST00000294161 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
TTC9C-201ENST00000294161 F6X3S4 739 aa18.3■□□□□ 0.52
TTC9C-201ENST00000294161 TBC1D9Q6ZT07 1266 aa18.29■□□□□ 0.52
TTC9C-201ENST00000294161 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
TTC9C-201ENST00000294161 PLCH1Q4KWH8 1693 aa18.29■□□□□ 0.52
TTC9C-201ENST00000294161 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
TTC9C-201ENST00000294161 SNX21Q969T3 373 aa18.28■□□□□ 0.52
TTC9C-201ENST00000294161 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
TTC9C-201ENST00000294161 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
TTC9C-201ENST00000294161 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
TTC9C-201ENST00000294161 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
TTC9C-201ENST00000294161 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.51
TTC9C-201ENST00000294161 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.51
TTC9C-201ENST00000294161 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
TTC9C-201ENST00000294161 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
TTC9C-201ENST00000294161 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
TTC9C-201ENST00000294161 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
TTC9C-201ENST00000294161 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
TTC9C-201ENST00000294161 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
TTC9C-201ENST00000294161 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
TTC9C-201ENST00000294161 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
TTC9C-201ENST00000294161 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
TTC9C-201ENST00000294161 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
TTC9C-201ENST00000294161 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
TTC9C-201ENST00000294161 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
TTC9C-201ENST00000294161 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
TTC9C-201ENST00000294161 ERBB3P21860 1342 aa18.24■□□□□ 0.51
TTC9C-201ENST00000294161 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
TTC9C-201ENST00000294161 GSPT1P15170 499 aaKnown RBP18.23■□□□□ 0.51
TTC9C-201ENST00000294161 SRCIN1Q9C0H9 1055 aa18.23■□□□□ 0.51
TTC9C-201ENST00000294161 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
TTC9C-201ENST00000294161 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
TTC9C-201ENST00000294161 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
TTC9C-201ENST00000294161 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
TTC9C-201ENST00000294161 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
TTC9C-201ENST00000294161 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
TTC9C-201ENST00000294161 MPRIPQ6WCQ1 1025 aa18.22■□□□□ 0.51
TTC9C-201ENST00000294161 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
TTC9C-201ENST00000294161 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms