RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 FAM208AQ9UK61 1670 aaKnown RBP24.08■■□□□ 1.44
BRAF-201ENST00000288602 SMARCA5O60264 1052 aaPredicted RBP24.07■■□□□ 1.44
BRAF-201ENST00000288602 TEFQ10587 303 aa24.07■■□□□ 1.44
BRAF-201ENST00000288602 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
BRAF-201ENST00000288602 BTBD11A6QL63 1104 aa24.06■■□□□ 1.44
BRAF-201ENST00000288602 EIF4A1P60842 406 aaKnown RBP24.06■■□□□ 1.44
BRAF-201ENST00000288602 OTUD7AQ8TE49 926 aaPredicted RBP24.06■■□□□ 1.44
BRAF-201ENST00000288602 KIF1AQ12756 1690 aa24.06■■□□□ 1.44
BRAF-201ENST00000288602 C1orf141Q5JVX7 400 aa24.05■■□□□ 1.44
BRAF-201ENST00000288602 MED1Q15648 1581 aaPredicted RBP24.05■■□□□ 1.44
BRAF-201ENST00000288602 PLEKHM2Q8IWE5 1019 aa24.04■■□□□ 1.44
BRAF-201ENST00000288602 AMOTQ4VCS5 1084 aa24.04■■□□□ 1.44
BRAF-201ENST00000288602 BECN1Q14457 450 aa24.03■■□□□ 1.44
BRAF-201ENST00000288602 ERBB3P21860 1342 aa24.03■■□□□ 1.44
BRAF-201ENST00000288602 RNMTO43148 476 aaKnown RBP24.03■■□□□ 1.44
BRAF-201ENST00000288602 ANXA1P04083 346 aa24.03■■□□□ 1.44
BRAF-201ENST00000288602 GSPT1P15170 499 aaKnown RBP24.02■■□□□ 1.44
BRAF-201ENST00000288602 ALS2Q96Q42 1657 aa24.02■■□□□ 1.44
BRAF-201ENST00000288602 TBC1D2Q9BYX2 928 aa24.02■■□□□ 1.44
BRAF-201ENST00000288602 SLKQ9H2G2 1235 aaPredicted RBP24.01■■□□□ 1.43
BRAF-201ENST00000288602 CHPF2Q9P2E5 772 aa24.01■■□□□ 1.43
BRAF-201ENST00000288602 GNAI2P04899 355 aa24.01■■□□□ 1.43
BRAF-201ENST00000288602 CHRNA2Q15822 529 aa24.01■■□□□ 1.43
BRAF-201ENST00000288602 NLRP2Q9NX02 1062 aa24.01■■□□□ 1.43
BRAF-201ENST00000288602 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
BRAF-201ENST00000288602 TBC1D9Q6ZT07 1266 aa24■■□□□ 1.43
BRAF-201ENST00000288602 NFKBIBQ15653 356 aa24■■□□□ 1.43
BRAF-201ENST00000288602 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
BRAF-201ENST00000288602 CADPS2Q86UW7 1296 aa23.99■■□□□ 1.43
BRAF-201ENST00000288602 SPRYD3Q8NCJ5 442 aa23.99■■□□□ 1.43
BRAF-201ENST00000288602 SOS1Q07889 1333 aaPredicted RBP23.99■■□□□ 1.43
BRAF-201ENST00000288602 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
BRAF-201ENST00000288602 EXOC6BQ9Y2D4 811 aa23.98■■□□□ 1.43
BRAF-201ENST00000288602 KDM3BQ7LBC6 1761 aa23.97■■□□□ 1.43
BRAF-201ENST00000288602 CACNA1FO60840 1977 aa23.97■■□□□ 1.43
BRAF-201ENST00000288602 PNMA6EA0A0J9YXQ4 647 aa23.97■■□□□ 1.43
BRAF-201ENST00000288602 DEKP35659 375 aaKnown RBP23.97■■□□□ 1.43
BRAF-201ENST00000288602 HMMRO75330 724 aa23.96■■□□□ 1.43
BRAF-201ENST00000288602 USP44Q9H0E7 712 aa23.96■■□□□ 1.43
BRAF-201ENST00000288602 LRRFIP2Q9Y608 721 aaKnown RBP23.96■■□□□ 1.43
BRAF-201ENST00000288602 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
BRAF-201ENST00000288602 TTC22Q5TAA0 569 aa23.95■■□□□ 1.42
BRAF-201ENST00000288602 DCCP43146 1447 aa23.95■■□□□ 1.42
BRAF-201ENST00000288602 GNAI3P08754 354 aa23.94■■□□□ 1.42
BRAF-201ENST00000288602 CSB-PGBD3P0DP91 1061 aa23.94■■□□□ 1.42
BRAF-201ENST00000288602 RAPGEF4Q8WZA2 1011 aa23.94■■□□□ 1.42
BRAF-201ENST00000288602 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
BRAF-201ENST00000288602 PI4KAP2A4QPH2 592 aa23.92■■□□□ 1.42
BRAF-201ENST00000288602 PI4KAP1Q8N8J0 262 aa23.92■■□□□ 1.42
BRAF-201ENST00000288602 USP35Q9P2H5 1018 aa23.92■■□□□ 1.42
BRAF-201ENST00000288602 CDC45O75419 566 aa23.91■■□□□ 1.42
BRAF-201ENST00000288602 FRAT2O75474 233 aaPredicted RBP23.91■■□□□ 1.42
BRAF-201ENST00000288602 RBM25P49756 843 aaKnown RBP23.91■■□□□ 1.42
BRAF-201ENST00000288602 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
BRAF-201ENST00000288602 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
BRAF-201ENST00000288602 GIGYF1O75420 1035 aaPredicted RBP23.9■■□□□ 1.42
BRAF-201ENST00000288602 HOXB7P09629 217 aa23.9■■□□□ 1.42
BRAF-201ENST00000288602 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
BRAF-201ENST00000288602 ATP8B2P98198 1209 aa23.9■■□□□ 1.42
BRAF-201ENST00000288602 SLC39A6Q13433 755 aa23.9■■□□□ 1.42
BRAF-201ENST00000288602 TSHZ3Q63HK5 1081 aa23.9■■□□□ 1.42
BRAF-201ENST00000288602 SRCIN1Q9C0H9 1055 aa23.9■■□□□ 1.42
BRAF-201ENST00000288602 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.42
BRAF-201ENST00000288602 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.42
BRAF-201ENST00000288602 BRINP3Q76B58 766 aa23.89■■□□□ 1.42
BRAF-201ENST00000288602 NBPF7P0C2Y1 421 aaPredicted RBP23.88■■□□□ 1.41
BRAF-201ENST00000288602 SDSP20132 328 aa23.88■■□□□ 1.41
BRAF-201ENST00000288602 TATP17735 454 aaPredicted RBP23.88■■□□□ 1.41
BRAF-201ENST00000288602 DNAAF4Q8WXU2 420 aa23.88■■□□□ 1.41
BRAF-201ENST00000288602 XIRP1Q702N8 1843 aaKnown RBP23.88■■□□□ 1.41
BRAF-201ENST00000288602 MEGF6O75095 1541 aa23.87■■□□□ 1.41
BRAF-201ENST00000288602 PXDNLA1KZ92 1463 aa23.87■■□□□ 1.41
BRAF-201ENST00000288602 ANTXR1Q9H6X2 564 aa23.87■■□□□ 1.41
BRAF-201ENST00000288602 ZNF335Q9H4Z2 1342 aaPredicted RBP23.86■■□□□ 1.41
BRAF-201ENST00000288602 KDM4FA0A1W2PPD8 638 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 NFATC2IPQ8NCF5 419 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 KIF2CQ99661 725 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 DBF4Q9UBU7 674 aaPredicted RBP23.86■■□□□ 1.41
BRAF-201ENST00000288602 COL18A1P39060 1754 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 ADCY9O60503 1353 aa23.86■■□□□ 1.41
BRAF-201ENST00000288602 PHKG2P15735 406 aa23.85■■□□□ 1.41
BRAF-201ENST00000288602 LRRCC1Q9C099 1032 aa23.85■■□□□ 1.41
BRAF-201ENST00000288602 PDE1AP54750 535 aa23.84■■□□□ 1.41
BRAF-201ENST00000288602 KDM6AO15550 1401 aaPredicted RBP23.84■■□□□ 1.41
BRAF-201ENST00000288602 RBM42Q9BTD8 480 aaKnown RBP23.84■■□□□ 1.41
BRAF-201ENST00000288602 OVOS2A0A0G2JMS6 1433 aa23.83■■□□□ 1.41
BRAF-201ENST00000288602 HEG1Q9ULI3 1381 aa23.83■■□□□ 1.41
BRAF-201ENST00000288602 PPP1R42Q7Z4L9 355 aa23.83■■□□□ 1.41
BRAF-201ENST00000288602 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
BRAF-201ENST00000288602 MAP3K2Q9Y2U5 619 aa23.83■■□□□ 1.41
BRAF-201ENST00000288602 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.41
BRAF-201ENST00000288602 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.4
BRAF-201ENST00000288602 SIPA1L3O60292 1781 aaPredicted RBP23.82■■□□□ 1.4
BRAF-201ENST00000288602 AIMP1Q12904 312 aaKnown RBP23.82■■□□□ 1.4
BRAF-201ENST00000288602 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
BRAF-201ENST00000288602 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
BRAF-201ENST00000288602 ZNF790Q6PG37 636 aa23.82■■□□□ 1.4
BRAF-201ENST00000288602 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
BRAF-201ENST00000288602 IBTKQ9P2D0 1353 aaPredicted RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms