RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 MICALL1Q8N3F8 863 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 WASF1Q92558 559 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 PAIP2Q9BPZ3 127 aaKnown RBP10.55□□□□□ -0.72
SMC2-201ENST00000286398 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
SMC2-201ENST00000286398 YEATS4O95619 227 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
SMC2-201ENST00000286398 VGLL3A8MV65 326 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 TTC31Q49AM3 519 aaPredicted RBP10.55□□□□□ -0.72
SMC2-201ENST00000286398 IL1RAPL2Q9NP60 686 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 ZNF165P49910 485 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 CCDC6Q16204 474 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 DDX23Q9BUQ8 820 aaKnown RBP10.55□□□□□ -0.72
SMC2-201ENST00000286398 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 TDRD12Q587J7 1177 aaKnown RBP10.54□□□□□ -0.72
SMC2-201ENST00000286398 CCDC12Q8WUD4 166 aaPredicted RBP10.54□□□□□ -0.72
SMC2-201ENST00000286398 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 TAOK3Q9H2K8 898 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 ANAPC15P60006 121 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 AACSQ86V21 672 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 PPP1R12BO60237 982 aaPredicted RBP10.54□□□□□ -0.72
SMC2-201ENST00000286398 PSME1Q06323 249 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 MCM6Q14566 821 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
SMC2-201ENST00000286398 CNNM1Q9NRU3 951 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 NEBLO76041 1014 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 LIG1P18858 919 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 UVSSAQ2YD98 709 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
SMC2-201ENST00000286398 GDPD2Q9HCC8 539 aa10.54□□□□□ -0.72
SMC2-201ENST00000286398 MACROD2A1Z1Q3 448 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMC2-201ENST00000286398 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
SMC2-201ENST00000286398 SRGAP3O43295 1099 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 ATRIPQ8WXE1 791 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 CTNNBL1Q8WYA6 563 aaPredicted RBP10.53□□□□□ -0.72
SMC2-201ENST00000286398 CEP83Q9Y592 693 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 CAPN2P17655 700 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 KLHL40Q2TBA0 621 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
SMC2-201ENST00000286398 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 CCDC171Q6TFL3 1326 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
SMC2-201ENST00000286398 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
SMC2-201ENST00000286398 FAM177BA6PVY3 158 aa10.52□□□□□ -0.72
SMC2-201ENST00000286398 ZSCAN25Q6NSZ9 544 aa10.52□□□□□ -0.72
SMC2-201ENST00000286398 FAM114A1Q8IWE2 563 aa10.52□□□□□ -0.72
SMC2-201ENST00000286398 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.72
SMC2-201ENST00000286398 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC2-201ENST00000286398 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
SMC2-201ENST00000286398 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 GNL3LQ9NVN8 582 aaKnown RBP10.52□□□□□ -0.73
SMC2-201ENST00000286398 HSF2BPO75031 334 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 IGSF3O75054 1194 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
SMC2-201ENST00000286398 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC2-201ENST00000286398 SETSIPP0DME0 302 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
SMC2-201ENST00000286398 MSL1Q68DK7 614 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 SKAP1Q86WV1 359 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 FSIP1Q8NA03 581 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 RNF216Q9NWF9 866 aaPredicted RBP10.52□□□□□ -0.73
SMC2-201ENST00000286398 ERCC6Q03468 1493 aa10.52□□□□□ -0.73
SMC2-201ENST00000286398 NAA25Q14CX7 972 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 STX1AQ16623 288 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 EBAG9O00559 213 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 XRCC6P12956 609 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMC2-201ENST00000286398 C10orf67Q8IYJ2 551 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 CCDC150Q8NCX0 1101 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 HYPKQ9NX55 129 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
SMC2-201ENST00000286398 BIN1O00499 593 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 ZNF830Q96NB3 372 aaPredicted RBP10.51□□□□□ -0.73
SMC2-201ENST00000286398 CCDC94Q9BW85 323 aaPredicted RBP10.51□□□□□ -0.73
SMC2-201ENST00000286398 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 CAVIN2O95810 425 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 CNNM3Q8NE01 707 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 C8orf76Q96K31 380 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
SMC2-201ENST00000286398 GBP6Q6ZN66 633 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
SMC2-201ENST00000286398 OTUD6BQ8N6M0 293 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 TSG101Q99816 390 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
SMC2-201ENST00000286398 TFIP11Q9UBB9 837 aaKnown RBP10.5□□□□□ -0.73
SMC2-201ENST00000286398 EXOC6BQ9Y2D4 811 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 RASSF4Q9H2L5 321 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 DNAI1Q9UI46 699 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 ZKSCAN5Q9Y2L8 839 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms