RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 ERO1AQ96HE7 468 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 TBC1D2BQ9UPU7 963 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 SIRT1Q96EB6 747 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 MBIPQ9NS73 344 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 LMNB1P20700 586 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 BRDTQ58F21 947 aaPredicted RBP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 SUPT20HQ8NEM7 779 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 FHAD1B1AJZ9 1412 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 DDNO94850 711 aaPredicted RBP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 HSP90B1P14625 803 aaKnown RBP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 DOK7Q18PE1 504 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 PGBD3Q8N328 593 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 DAXXQ9UER7 740 aaPredicted RBP4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 RNF123Q5XPI4 1314 aa4.48□□□□□ -1.69
SEMA3D-201ENST00000284136 GADD45BO75293 160 aaPredicted RBP4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 COL9A1P20849 921 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 IGHMBP2P38935 993 aaKnown RBP4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 FLCNQ8NFG4 579 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 SLC4A9Q96Q91 983 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 EYA3Q99504 573 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 CARD11Q9BXL7 1154 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 FHOD3Q2V2M9 1422 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 ZMYND10O75800 440 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 UPP2O95045 317 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 TRIM47Q96LD4 638 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 GBA2Q9HCG7 927 aaPredicted RBP4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 SLC5A4Q9NY91 659 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 LRFN2Q9ULH4 789 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 NUP155O75694 1391 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 DPEP1P16444 411 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 CLUL1Q15846 466 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 CNKSR1Q969H4 720 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 CCDC180Q9P1Z9 1646 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 AGRPO00253 132 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 GLRX3O76003 335 aaKnown RBP4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 FOSBP53539 338 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 CCDC93Q567U6 631 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 NLGN2Q8NFZ4 835 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 TTC21AQ8NDW8 1320 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 STK31Q9BXU1 1019 aa4.47□□□□□ -1.69
SEMA3D-201ENST00000284136 ABCC8Q09428 1581 aa4.46□□□□□ -1.69
SEMA3D-201ENST00000284136 IREB2P48200 963 aaKnown RBP4.46□□□□□ -1.69
SEMA3D-201ENST00000284136 ARAP1Q96P48 1450 aa4.46□□□□□ -1.69
SEMA3D-201ENST00000284136 LARP1Q6PKG0 1096 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 TPTE2Q6XPS3 522 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 RNPC3Q96LT9 517 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 NDUFB9Q9Y6M9 179 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 WDR33Q9C0J8 1336 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 UACAQ9BZF9 1416 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 PTPRMP28827 1452 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 RAG1P15918 1043 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 PTPRTO14522 1441 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 FOXR1Q6PIV2 292 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 C12orf50Q8NA57 414 aaPredicted RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 TRMT112Q9UI30 125 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 U3KPZ7 1027 aaPredicted RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 LIG1P18858 919 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 ALDH1B1P30837 517 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 RUFY4Q6ZNE9 571 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 GTF3C2Q8WUA4 911 aaPredicted RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 SLC28A3Q9HAS3 691 aa4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-201ENST00000284136 FOXN1O15353 648 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 RASSF8Q8NHQ8 419 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 ANKRD24Q8TF21 1146 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 TCP10L2B9ZVM9 353 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 PPEF1O14829 653 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 PYGBP11216 843 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 FSTL1Q12841 308 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 NBPF9Q3BBW0 867 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 KCNH5Q8NCM2 988 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 DCBLD2Q96PD2 775 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 HSP90AB1P08238 724 aaKnown RBP4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 SERTAD1Q9UHV2 236 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 ATP10DQ9P241 1426 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 DLGAP5Q15398 846 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 JARID2Q92833 1246 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 SENP6Q9GZR1 1112 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 GZF1Q9H116 711 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 ITGB1BP2Q9UKP3 347 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 CLRN2A0PK11 232 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 NEUROD6Q96NK8 337 aa4.45□□□□□ -1.7
SEMA3D-201ENST00000284136 LOC105371045A0A1W2PR82 267 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 RRS1Q15050 365 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 ANO1Q5XXA6 986 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 CHST3Q7LGC8 479 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 CTU1Q7Z7A3 348 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 CCDC102AQ96A19 550 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 LARP6Q9BRS8 491 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 TCP11L1Q9NUJ3 509 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 MROH2BQ7Z745 1585 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 GNL2Q13823 731 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 APOL5Q9BWW9 433 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 ABCF2Q9UG63 623 aa4.44□□□□□ -1.7
SEMA3D-201ENST00000284136 UAP1L1Q3KQV9 507 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms