RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CCDC30Q5VVM6 783 aa28.01■■■□□ 2.07
CCDC7-201ENST00000277657 CHMP4BQ9H444 224 aaKnown RBP28.01■■■□□ 2.07
CCDC7-201ENST00000277657 KDM6AO15550 1401 aaPredicted RBP28.01■■■□□ 2.07
CCDC7-201ENST00000277657 TOM1L2Q6ZVM7 507 aa28■■■□□ 2.07
CCDC7-201ENST00000277657 HOXB7P09629 217 aa28■■■□□ 2.07
CCDC7-201ENST00000277657 IFNL2Q8IZJ0 200 aa28■■■□□ 2.07
CCDC7-201ENST00000277657 CARD10Q9BWT7 1032 aa28■■■□□ 2.07
CCDC7-201ENST00000277657 RWDD1Q9H446 243 aaPredicted RBP28■■■□□ 2.07
CCDC7-201ENST00000277657 RBM19Q9Y4C8 960 aaKnown RBP28■■■□□ 2.07
CCDC7-201ENST00000277657 INTS3Q68E01 1043 aaKnown RBP27.98■■■□□ 2.07
CCDC7-201ENST00000277657 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
CCDC7-201ENST00000277657 STK31Q9BXU1 1019 aa27.98■■■□□ 2.07
CCDC7-201ENST00000277657 HDAC1Q13547 482 aaPredicted RBP27.97■■■□□ 2.07
CCDC7-201ENST00000277657 CYP27B1O15528 508 aa27.96■■■□□ 2.07
CCDC7-201ENST00000277657 KCNQ3O43525 872 aa27.96■■■□□ 2.07
CCDC7-201ENST00000277657 G2E3Q7L622 706 aa27.95■■■□□ 2.07
CCDC7-201ENST00000277657 COL14A1Q05707 1796 aaKnown RBP27.95■■■□□ 2.07
CCDC7-201ENST00000277657 COL16A1Q07092 1604 aaPredicted RBP27.95■■■□□ 2.07
CCDC7-201ENST00000277657 MRC1P22897 1456 aa27.95■■■□□ 2.06
CCDC7-201ENST00000277657 HEG1Q9ULI3 1381 aa27.95■■■□□ 2.06
CCDC7-201ENST00000277657 PHLPP1O60346 1717 aa27.95■■■□□ 2.06
CCDC7-201ENST00000277657 LARP1Q6PKG0 1096 aaKnown RBP27.94■■■□□ 2.06
CCDC7-201ENST00000277657 DCAF5Q96JK2 942 aa27.93■■■□□ 2.06
CCDC7-201ENST00000277657 CHMP4AQ9BY43 222 aa27.93■■■□□ 2.06
CCDC7-201ENST00000277657 SLC52A2Q9HAB3 445 aa27.93■■■□□ 2.06
CCDC7-201ENST00000277657 HDGFL1Q5TGJ6 251 aa27.93■■■□□ 2.06
CCDC7-201ENST00000277657 HSP90AB1P08238 724 aaKnown RBP27.92■■■□□ 2.06
CCDC7-201ENST00000277657 EVA1CP58658 441 aa27.92■■■□□ 2.06
CCDC7-201ENST00000277657 STRN4Q9NRL3 753 aa27.92■■■□□ 2.06
CCDC7-201ENST00000277657 ILDR1Q86SU0 546 aaPredicted RBP27.91■■■□□ 2.06
CCDC7-201ENST00000277657 TOM1O60784 492 aa27.9■■■□□ 2.06
CCDC7-201ENST00000277657 IL2RBP14784 551 aa27.9■■■□□ 2.06
CCDC7-201ENST00000277657 FLIIQ13045 1269 aa27.9■■■□□ 2.06
CCDC7-201ENST00000277657 ZCRB1Q8TBF4 217 aaKnown RBP27.89■■■□□ 2.06
CCDC7-201ENST00000277657 NECTIN2Q92692 538 aa27.89■■■□□ 2.06
CCDC7-201ENST00000277657 PCDH11XQ9BZA7 1347 aa27.89■■■□□ 2.05
CCDC7-201ENST00000277657 PCDH11YQ9BZA8 1340 aa27.89■■■□□ 2.05
CCDC7-201ENST00000277657 BTG4Q9NY30 223 aa27.89■■■□□ 2.05
CCDC7-201ENST00000277657 SHANK3Q9BYB0 1731 aa27.87■■■□□ 2.05
CCDC7-201ENST00000277657 GIGYF1O75420 1035 aaPredicted RBP27.87■■■□□ 2.05
CCDC7-201ENST00000277657 NFATC2IPQ8NCF5 419 aa27.86■■■□□ 2.05
CCDC7-201ENST00000277657 ZNF790Q6PG37 636 aa27.85■■■□□ 2.05
CCDC7-201ENST00000277657 EIF2S2P20042 333 aaKnown RBP27.84■■■□□ 2.05
CCDC7-201ENST00000277657 CCT4P50991 539 aaKnown RBP27.84■■■□□ 2.05
CCDC7-201ENST00000277657 SMC5Q8IY18 1101 aa27.84■■■□□ 2.05
CCDC7-201ENST00000277657 N4BP2Q86UW6 1770 aaPredicted RBP27.84■■■□□ 2.05
CCDC7-201ENST00000277657 F6X3S4 739 aa27.83■■■□□ 2.05
CCDC7-201ENST00000277657 FKBP5Q13451 457 aaPredicted RBP27.83■■■□□ 2.05
CCDC7-201ENST00000277657 NKX1-1Q15270 411 aaPredicted RBP27.83■■■□□ 2.05
CCDC7-201ENST00000277657 PDZRN3Q9UPQ7 1066 aa27.83■■■□□ 2.04
CCDC7-201ENST00000277657 PXDNLA1KZ92 1463 aa27.82■■■□□ 2.04
CCDC7-201ENST00000277657 RGS3P49796 1198 aa27.82■■■□□ 2.04
CCDC7-201ENST00000277657 C1orf115Q9H7X2 142 aa27.81■■■□□ 2.04
CCDC7-201ENST00000277657 CHPF2Q9P2E5 772 aa27.81■■■□□ 2.04
CCDC7-201ENST00000277657 PDE4AP27815 886 aa27.81■■■□□ 2.04
CCDC7-201ENST00000277657 PIP4K2BP78356 416 aa27.81■■■□□ 2.04
CCDC7-201ENST00000277657 SLC39A6Q13433 755 aa27.8■■■□□ 2.04
CCDC7-201ENST00000277657 PHAXQ9H814 394 aaKnown RBP27.8■■■□□ 2.04
CCDC7-201ENST00000277657 BACH2Q9BYV9 841 aa27.79■■■□□ 2.04
CCDC7-201ENST00000277657 SLC4A10Q6U841 1118 aa27.78■■■□□ 2.04
CCDC7-201ENST00000277657 SIRT2Q8IXJ6 389 aa27.78■■■□□ 2.04
CCDC7-201ENST00000277657 DBF4Q9UBU7 674 aaPredicted RBP27.78■■■□□ 2.04
CCDC7-201ENST00000277657 DISP2A7MBM2 1401 aa27.78■■■□□ 2.04
CCDC7-201ENST00000277657 PLCH1Q4KWH8 1693 aa27.78■■■□□ 2.04
CCDC7-201ENST00000277657 CABP4P57796 275 aa27.78■■■□□ 2.04
CCDC7-201ENST00000277657 ERVV-2B6SEH9 535 aa27.77■■■□□ 2.04
CCDC7-201ENST00000277657 ATP10DQ9P241 1426 aa27.77■■■□□ 2.04
CCDC7-201ENST00000277657 C5P01031 1676 aa27.76■■■□□ 2.04
CCDC7-201ENST00000277657 PRAMEF22A3QJZ6 481 aa27.76■■■□□ 2.04
CCDC7-201ENST00000277657 MEIS3Q99687 375 aa27.76■■■□□ 2.04
CCDC7-201ENST00000277657 USP35Q9P2H5 1018 aa27.75■■■□□ 2.03
CCDC7-201ENST00000277657 UBAP1LF5GYI3 381 aa27.74■■■□□ 2.03
CCDC7-201ENST00000277657 ZNF496Q96IT1 587 aaPredicted RBP27.74■■■□□ 2.03
CCDC7-201ENST00000277657 NRAPQ86VF7 1730 aa27.73■■■□□ 2.03
CCDC7-201ENST00000277657 TTC5Q8N0Z6 440 aa27.73■■■□□ 2.03
CCDC7-201ENST00000277657 DDX54Q8TDD1 881 aaKnown RBP27.73■■■□□ 2.03
CCDC7-201ENST00000277657 GCC1Q96CN9 775 aa27.73■■■□□ 2.03
CCDC7-201ENST00000277657 RPAP2Q8IXW5 612 aaPredicted RBP27.72■■■□□ 2.03
CCDC7-201ENST00000277657 ANKRD44Q8N8A2 993 aa27.72■■■□□ 2.03
CCDC7-201ENST00000277657 GLI3P10071 1580 aa27.72■■■□□ 2.03
CCDC7-201ENST00000277657 NUCB1Q02818 461 aa27.71■■■□□ 2.03
CCDC7-201ENST00000277657 FMNL2Q96PY5 1086 aa27.71■■■□□ 2.03
CCDC7-201ENST00000277657 PAPPAQ13219 1627 aa27.71■■■□□ 2.03
CCDC7-201ENST00000277657 WNK3Q9BYP7 1800 aa27.71■■■□□ 2.03
CCDC7-201ENST00000277657 ADAMTS2O95450 1211 aa27.7■■■□□ 2.03
CCDC7-201ENST00000277657 ANXA1P04083 346 aa27.7■■■□□ 2.03
CCDC7-201ENST00000277657 PROSER3Q2NL68 480 aa27.7■■■□□ 2.03
CCDC7-201ENST00000277657 DDX21Q9NR30 783 aaKnown RBP eCLIP27.7■■■□□ 2.03
CCDC7-201ENST00000277657 HYPKQ9NX55 129 aa27.7■■■□□ 2.03
CCDC7-201ENST00000277657 SNRPA1P09661 255 aaKnown RBP27.7■■■□□ 2.02
CCDC7-201ENST00000277657 FAM161AQ3B820 660 aa27.7■■■□□ 2.02
CCDC7-201ENST00000277657 CEP85Q6P2H3 762 aa27.7■■■□□ 2.02
CCDC7-201ENST00000277657 UBR2Q8IWV8 1755 aa27.7■■■□□ 2.02
CCDC7-201ENST00000277657 TOGARAM1Q9Y4F4 1720 aa27.69■■■□□ 2.02
CCDC7-201ENST00000277657 PDIA6Q15084 440 aa27.69■■■□□ 2.02
CCDC7-201ENST00000277657 ADCY9O60503 1353 aa27.68■■■□□ 2.02
CCDC7-201ENST00000277657 C8orf34Q49A92 452 aa27.68■■■□□ 2.02
CCDC7-201ENST00000277657 PI4KAP2A4QPH2 592 aa27.67■■■□□ 2.02
CCDC7-201ENST00000277657 GNAI3P08754 354 aa27.67■■■□□ 2.02
CCDC7-201ENST00000277657 PI4KAP1Q8N8J0 262 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms