RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 PYM1Q9BRP8 204 aaKnown RBP15.38■□□□□ 0.05
PRDM16-201ENST00000270722 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
PRDM16-201ENST00000270722 ME1P48163 572 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
PRDM16-201ENST00000270722 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 COMMD10Q9Y6G5 202 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 MTHFSP49914 203 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 TAX1BP1Q86VP1 789 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 BANK1Q8NDB2 785 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 MYCBPQ99417 103 aaPredicted RBP15.37■□□□□ 0.05
PRDM16-201ENST00000270722 MAP3K7CLP57077 242 aa15.37■□□□□ 0.05
PRDM16-201ENST00000270722 TTLL12Q14166 644 aaPredicted RBP15.37■□□□□ 0.05
PRDM16-201ENST00000270722 ZSCAN31Q96LW9 406 aaPredicted RBP15.37■□□□□ 0.05
PRDM16-201ENST00000270722 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
PRDM16-201ENST00000270722 SSBP05455 408 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRDM16-201ENST00000270722 FERP16591 822 aa15.36■□□□□ 0.05
PRDM16-201ENST00000270722 CEP83Q9Y592 693 aa15.36■□□□□ 0.05
PRDM16-201ENST00000270722 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-201ENST00000270722 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
PRDM16-201ENST00000270722 CCDC6Q16204 474 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 DAPK1P53355 1430 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 GBP6Q6ZN66 633 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 PLVAPQ9BX97 442 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-201ENST00000270722 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 ARHGAP5Q13017 1502 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 MYO1BO43795 1136 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 SLU7O95391 586 aaKnown RBP15.35■□□□□ 0.05
PRDM16-201ENST00000270722 EIF5P55010 431 aaKnown RBP15.35■□□□□ 0.05
PRDM16-201ENST00000270722 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
PRDM16-201ENST00000270722 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-201ENST00000270722 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-201ENST00000270722 TSNARE1Q96NA8 513 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 ESPNB1AK53 854 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
PRDM16-201ENST00000270722 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-201ENST00000270722 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
PRDM16-201ENST00000270722 RAI14Q9P0K7 980 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 FOSBP53539 338 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-201ENST00000270722 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
PRDM16-201ENST00000270722 CCDC172P0C7W6 258 aa15.33■□□□□ 0.05
PRDM16-201ENST00000270722 HMOX1P09601 288 aa15.33■□□□□ 0.05
PRDM16-201ENST00000270722 ACTN2P35609 894 aa15.33■□□□□ 0.05
PRDM16-201ENST00000270722 AP1ARQ63HQ0 302 aa15.33■□□□□ 0.05
PRDM16-201ENST00000270722 SMAP1Q8IYB5 467 aaPredicted RBP15.33■□□□□ 0.05
PRDM16-201ENST00000270722 SPA17Q15506 151 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 HFM1A2PYH4 1435 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
PRDM16-201ENST00000270722 C10orf67Q8IYJ2 551 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 NUP133Q8WUM0 1156 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 NEK4P51957 841 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
PRDM16-201ENST00000270722 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 NAP1L3Q99457 506 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-201ENST00000270722 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-201ENST00000270722 IQCA1Q86XH1 822 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
PRDM16-201ENST00000270722 CCDC82Q8N4S0 544 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
PRDM16-201ENST00000270722 ARHGAP29Q52LW3 1261 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 C6orf163Q5TEZ5 329 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 RASSF4Q9H2L5 321 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 GSTTP1A0A1W2PQM5 241 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 BAG4O95429 457 aaKnown RBP15.31■□□□□ 0.04
PRDM16-201ENST00000270722 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 LDHCP07864 332 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 RBBP5Q15291 538 aaKnown RBP15.31■□□□□ 0.04
PRDM16-201ENST00000270722 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
PRDM16-201ENST00000270722 HSPA4P34932 840 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 CRBNQ96SW2 442 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
PRDM16-201ENST00000270722 CTNNA2P26232 953 aa15.3■□□□□ 0.04
PRDM16-201ENST00000270722 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
PRDM16-201ENST00000270722 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-201ENST00000270722 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
PRDM16-201ENST00000270722 CCDC50Q8IVM0 306 aa15.3■□□□□ 0.04
PRDM16-201ENST00000270722 DDX23Q9BUQ8 820 aaKnown RBP15.3■□□□□ 0.04
PRDM16-201ENST00000270722 DBN1Q16643 649 aa15.3■□□□□ 0.04
PRDM16-201ENST00000270722 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
PRDM16-201ENST00000270722 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
PRDM16-201ENST00000270722 USP5P45974 858 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 AMPD3Q01432 767 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms