RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 REC8O95072 547 aa29.59■■■□□ 2.33
SH3GL1-201ENST00000269886 PNMA6EA0A0J9YXQ4 647 aa29.59■■■□□ 2.33
SH3GL1-201ENST00000269886 ERC2O15083 957 aa29.59■■■□□ 2.33
SH3GL1-201ENST00000269886 BAG4O95429 457 aaKnown RBP29.58■■■□□ 2.33
SH3GL1-201ENST00000269886 KCNA6P17658 529 aa29.57■■■□□ 2.32
SH3GL1-201ENST00000269886 PTMSP20962 102 aa29.57■■■□□ 2.32
SH3GL1-201ENST00000269886 CLEC17AQ6ZS10 378 aa29.56■■■□□ 2.32
SH3GL1-201ENST00000269886 ABTB2Q8N961 1025 aa29.56■■■□□ 2.32
SH3GL1-201ENST00000269886 THEMISQ8N1K5 641 aaPredicted RBP29.56■■■□□ 2.32
SH3GL1-201ENST00000269886 PKP1Q13835 747 aa29.55■■■□□ 2.32
SH3GL1-201ENST00000269886 ISY1Q9ULR0 285 aaKnown RBP29.55■■■□□ 2.32
SH3GL1-201ENST00000269886 LRRC37A3O60309 1634 aa29.55■■■□□ 2.32
SH3GL1-201ENST00000269886 ST18O60284 1047 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 GNAI3P08754 354 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 USHBP1Q8N6Y0 703 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 LRRCC1Q9C099 1032 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 NWD1Q149M9 1564 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 GOLGA6L22H0YM25 854 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 SALL3Q9BXA9 1300 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 MAP3K5Q99683 1374 aa29.54■■■□□ 2.32
SH3GL1-201ENST00000269886 ZGPATQ8N5A5 531 aaKnown RBP29.53■■■□□ 2.32
SH3GL1-201ENST00000269886 FAM208AQ9UK61 1670 aaKnown RBP29.53■■■□□ 2.32
SH3GL1-201ENST00000269886 ATP8B2P98198 1209 aa29.52■■■□□ 2.32
SH3GL1-201ENST00000269886 TAF7Q15545 349 aaPredicted RBP29.52■■■□□ 2.32
SH3GL1-201ENST00000269886 C14orf37Q86TY3 774 aa29.52■■■□□ 2.32
SH3GL1-201ENST00000269886 LRRFIP2Q9Y608 721 aaKnown RBP29.52■■■□□ 2.32
SH3GL1-201ENST00000269886 NUCB2P80303 420 aa29.51■■■□□ 2.31
SH3GL1-201ENST00000269886 CYP2E1P05181 493 aaPredicted RBP29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 XRN1Q8IZH2 1706 aaKnown RBP29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 MARF1Q9Y4F3 1742 aaKnown RBP29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 MX1P20591 662 aa29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 DDX49Q9Y6V7 483 aaKnown RBP29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 ANKARQ7Z5J8 1434 aa29.5■■■□□ 2.31
SH3GL1-201ENST00000269886 MCTP1Q6DN14 999 aa29.49■■■□□ 2.31
SH3GL1-201ENST00000269886 IBTKQ9P2D0 1353 aaPredicted RBP29.48■■■□□ 2.31
SH3GL1-201ENST00000269886 USP44Q9H0E7 712 aa29.48■■■□□ 2.31
SH3GL1-201ENST00000269886 PHAXQ9H814 394 aaKnown RBP29.47■■■□□ 2.31
SH3GL1-201ENST00000269886 KLHL40Q2TBA0 621 aa29.47■■■□□ 2.31
SH3GL1-201ENST00000269886 ESYT1Q9BSJ8 1104 aa29.46■■■□□ 2.31
SH3GL1-201ENST00000269886 HDGFL1Q5TGJ6 251 aa29.46■■■□□ 2.31
SH3GL1-201ENST00000269886 RILPL2Q969X0 211 aa29.46■■■□□ 2.31
SH3GL1-201ENST00000269886 CWC22Q9HCG8 908 aaKnown RBP29.46■■■□□ 2.31
SH3GL1-201ENST00000269886 TRIM6-TRIM34B2RNG4 842 aa29.45■■■□□ 2.3
SH3GL1-201ENST00000269886 NEK4P51957 841 aa29.44■■■□□ 2.3
SH3GL1-201ENST00000269886 UBTFL1P0CB47 393 aaPredicted RBP29.43■■■□□ 2.3
SH3GL1-201ENST00000269886 BABAM1Q9NWV8 329 aa29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 ZDHHC9Q9Y397 364 aa29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 SOS1Q07889 1333 aaPredicted RBP29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 CHMLP26374 656 aa29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 UNC5CLQ8IV45 518 aa29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 RBM33Q96EV2 1170 aaKnown RBP29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 IL1RAPL2Q9NP60 686 aa29.42■■■□□ 2.3
SH3GL1-201ENST00000269886 PALD1Q9ULE6 856 aa29.41■■■□□ 2.3
SH3GL1-201ENST00000269886 EIF2S2P20042 333 aaKnown RBP29.41■■■□□ 2.3
SH3GL1-201ENST00000269886 LMBRD1Q9NUN5 540 aa29.41■■■□□ 2.3
SH3GL1-201ENST00000269886 STAP2Q9UGK3 403 aa29.4■■■□□ 2.3
SH3GL1-201ENST00000269886 TUBGCP6Q96RT7 1819 aa29.4■■■□□ 2.3
SH3GL1-201ENST00000269886 ANO2Q9NQ90 1003 aa29.4■■■□□ 2.3
SH3GL1-201ENST00000269886 NCLP19338 710 aaKnown RBP29.39■■■□□ 2.3
SH3GL1-201ENST00000269886 LGR6Q9HBX8 967 aa29.39■■■□□ 2.3
SH3GL1-201ENST00000269886 PHF8Q9UPP1 1060 aa29.39■■■□□ 2.3
SH3GL1-201ENST00000269886 CACNA1FO60840 1977 aa29.39■■■□□ 2.29
SH3GL1-201ENST00000269886 NBPF6Q5VWK0 638 aa29.38■■■□□ 2.29
SH3GL1-201ENST00000269886 TMX3Q96JJ7 454 aa29.38■■■□□ 2.29
SH3GL1-201ENST00000269886 NBPF4Q96M43 638 aa29.38■■■□□ 2.29
SH3GL1-201ENST00000269886 CHAMP1Q96JM3 812 aa29.38■■■□□ 2.29
SH3GL1-201ENST00000269886 PXDNLA1KZ92 1463 aa29.38■■■□□ 2.29
SH3GL1-201ENST00000269886 SSH3Q8TE77 659 aa29.37■■■□□ 2.29
SH3GL1-201ENST00000269886 ZBTB7CA1YPR0 619 aa29.37■■■□□ 2.29
SH3GL1-201ENST00000269886 NUTM1Q86Y26 1132 aa29.37■■■□□ 2.29
SH3GL1-201ENST00000269886 SRCIN1Q9C0H9 1055 aa29.37■■■□□ 2.29
SH3GL1-201ENST00000269886 CAVIN1Q6NZI2 390 aaKnown RBP29.36■■■□□ 2.29
SH3GL1-201ENST00000269886 PPP1R42Q7Z4L9 355 aa29.36■■■□□ 2.29
SH3GL1-201ENST00000269886 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
SH3GL1-201ENST00000269886 CEMIPQ8WUJ3 1361 aa29.36■■■□□ 2.29
SH3GL1-201ENST00000269886 IP6K1Q92551 441 aa29.36■■■□□ 2.29
SH3GL1-201ENST00000269886 PRPF40AO75400 957 aaKnown RBP29.35■■■□□ 2.29
SH3GL1-201ENST00000269886 CLCN1P35523 988 aa29.35■■■□□ 2.29
SH3GL1-201ENST00000269886 SURF6O75683 361 aaKnown RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 EIF4A1P60842 406 aaKnown RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 FOXD4L5Q5VV16 416 aaPredicted RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 FOXD4L4Q8WXT5 416 aaPredicted RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 IL25Q9H293 177 aa29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 KCNQ3O43525 872 aa29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 MCCP23508 829 aa29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 NOL8Q76FK4 1167 aaKnown RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 LTN1O94822 1766 aa29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 SETD1BQ9UPS6 1966 aaKnown RBP29.34■■■□□ 2.29
SH3GL1-201ENST00000269886 CHPF2Q9P2E5 772 aa29.33■■■□□ 2.29
SH3GL1-201ENST00000269886 N4BP2Q86UW6 1770 aaPredicted RBP29.33■■■□□ 2.29
SH3GL1-201ENST00000269886 ERBB4Q15303 1308 aa29.33■■■□□ 2.29
SH3GL1-201ENST00000269886 NBPF7P0C2Y1 421 aaPredicted RBP29.33■■■□□ 2.29
SH3GL1-201ENST00000269886 MAP4K4O95819 1239 aaPredicted RBP29.32■■■□□ 2.28
SH3GL1-201ENST00000269886 NASPP49321 788 aaPredicted RBP29.31■■■□□ 2.28
SH3GL1-201ENST00000269886 ANXA1P04083 346 aa29.31■■■□□ 2.28
SH3GL1-201ENST00000269886 TRIM44Q96DX7 344 aaPredicted RBP29.31■■■□□ 2.28
SH3GL1-201ENST00000269886 ESPNB1AK53 854 aa29.3■■■□□ 2.28
SH3GL1-201ENST00000269886 SRGAP3O43295 1099 aa29.3■■■□□ 2.28
SH3GL1-201ENST00000269886 POLA2Q14181 598 aa29.3■■■□□ 2.28
SH3GL1-201ENST00000269886 ZSCAN23Q3MJ62 389 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms