RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 HMMRO75330 724 aa12.56□□□□□ -0.4
GAREM1-201ENST00000269209 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
GAREM1-201ENST00000269209 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
GAREM1-201ENST00000269209 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
GAREM1-201ENST00000269209 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
GAREM1-201ENST00000269209 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
GAREM1-201ENST00000269209 KRT28Q7Z3Y7 464 aa12.55□□□□□ -0.4
GAREM1-201ENST00000269209 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
GAREM1-201ENST00000269209 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
GAREM1-201ENST00000269209 KIF2CQ99661 725 aa12.55□□□□□ -0.4
GAREM1-201ENST00000269209 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
GAREM1-201ENST00000269209 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
GAREM1-201ENST00000269209 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
GAREM1-201ENST00000269209 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 FMN2Q9NZ56 1722 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
GAREM1-201ENST00000269209 HSPA2P54652 639 aa12.53□□□□□ -0.4
GAREM1-201ENST00000269209 USP44Q9H0E7 712 aa12.53□□□□□ -0.4
GAREM1-201ENST00000269209 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
GAREM1-201ENST00000269209 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
GAREM1-201ENST00000269209 AIMP1Q12904 312 aaKnown RBP12.53□□□□□ -0.4
GAREM1-201ENST00000269209 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
GAREM1-201ENST00000269209 NPHP4O75161 1426 aaPredicted RBP12.52□□□□□ -0.4
GAREM1-201ENST00000269209 ADGRL3Q9HAR2 1447 aa12.52□□□□□ -0.4
GAREM1-201ENST00000269209 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.4
GAREM1-201ENST00000269209 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.4
GAREM1-201ENST00000269209 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
GAREM1-201ENST00000269209 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
GAREM1-201ENST00000269209 ARHGEF25Q86VW2 580 aa12.52□□□□□ -0.41
GAREM1-201ENST00000269209 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
GAREM1-201ENST00000269209 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 GNAI3P08754 354 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 CSB-PGBD3P0DP91 1061 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 PDE1AP54750 535 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 LRRCC1Q9C099 1032 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
GAREM1-201ENST00000269209 SURF6O75683 361 aaKnown RBP12.51□□□□□ -0.41
GAREM1-201ENST00000269209 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
GAREM1-201ENST00000269209 ATF3P18847 181 aa12.5□□□□□ -0.41
GAREM1-201ENST00000269209 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
GAREM1-201ENST00000269209 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
GAREM1-201ENST00000269209 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
GAREM1-201ENST00000269209 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
GAREM1-201ENST00000269209 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
GAREM1-201ENST00000269209 MCM4P33991 863 aa12.49□□□□□ -0.41
GAREM1-201ENST00000269209 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
GAREM1-201ENST00000269209 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
GAREM1-201ENST00000269209 MX1P20591 662 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
GAREM1-201ENST00000269209 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
GAREM1-201ENST00000269209 MYL6BP14649 208 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 OS9Q13438 667 aaPredicted RBP12.48□□□□□ -0.41
GAREM1-201ENST00000269209 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
GAREM1-201ENST00000269209 LTN1O94822 1766 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
GAREM1-201ENST00000269209 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 PXDNQ92626 1479 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 CEMIPQ8WUJ3 1361 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
GAREM1-201ENST00000269209 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
GAREM1-201ENST00000269209 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.41
GAREM1-201ENST00000269209 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
GAREM1-201ENST00000269209 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
GAREM1-201ENST00000269209 SNX21Q969T3 373 aa12.46□□□□□ -0.41
GAREM1-201ENST00000269209 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.42
GAREM1-201ENST00000269209 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.42
GAREM1-201ENST00000269209 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.42
GAREM1-201ENST00000269209 JARID2Q92833 1246 aaPredicted RBP12.46□□□□□ -0.42
GAREM1-201ENST00000269209 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
GAREM1-201ENST00000269209 NFAT5O94916 1531 aa12.45□□□□□ -0.42
GAREM1-201ENST00000269209 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
GAREM1-201ENST00000269209 SOS1Q07889 1333 aaPredicted RBP12.45□□□□□ -0.42
GAREM1-201ENST00000269209 TRAK2O60296 914 aa12.45□□□□□ -0.42
GAREM1-201ENST00000269209 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
GAREM1-201ENST00000269209 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
GAREM1-201ENST00000269209 ERBB3P21860 1342 aa12.44□□□□□ -0.42
GAREM1-201ENST00000269209 ERC2O15083 957 aa12.44□□□□□ -0.42
GAREM1-201ENST00000269209 SSFA2P28290 1259 aa12.44□□□□□ -0.42
GAREM1-201ENST00000269209 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
GAREM1-201ENST00000269209 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
GAREM1-201ENST00000269209 REC8O95072 547 aa12.44□□□□□ -0.42
GAREM1-201ENST00000269209 PKP1Q13835 747 aa12.43□□□□□ -0.42
GAREM1-201ENST00000269209 IL25Q9H293 177 aa12.43□□□□□ -0.42
GAREM1-201ENST00000269209 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
GAREM1-201ENST00000269209 NEK4P51957 841 aa12.43□□□□□ -0.42
GAREM1-201ENST00000269209 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
GAREM1-201ENST00000269209 RHPN1Q8TCX5 695 aa12.43□□□□□ -0.42
GAREM1-201ENST00000269209 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
GAREM1-201ENST00000269209 SIL1Q9H173 461 aa12.43□□□□□ -0.42
GAREM1-201ENST00000269209 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms