RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 SNX21Q969T3 373 aa19.71■□□□□ 0.75
MAP1LC3B-201ENST00000268607 RBM25P49756 843 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-201ENST00000268607 SKOR2Q2VWA4 1001 aaPredicted RBP19.7■□□□□ 0.74
MAP1LC3B-201ENST00000268607 HAP1P54257 671 aaPredicted RBP19.7■□□□□ 0.74
MAP1LC3B-201ENST00000268607 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
MAP1LC3B-201ENST00000268607 ZSCAN30Q86W11 494 aa19.7■□□□□ 0.74
MAP1LC3B-201ENST00000268607 CCDC173Q0VFZ6 552 aa19.69■□□□□ 0.74
MAP1LC3B-201ENST00000268607 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
MAP1LC3B-201ENST00000268607 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
MAP1LC3B-201ENST00000268607 HDAC1Q13547 482 aaPredicted RBP19.69■□□□□ 0.74
MAP1LC3B-201ENST00000268607 CIZ1Q9ULV3 898 aaPredicted RBP19.69■□□□□ 0.74
MAP1LC3B-201ENST00000268607 DLG5Q8TDM6 1919 aa19.68■□□□□ 0.74
MAP1LC3B-201ENST00000268607 LTN1O94822 1766 aa19.68■□□□□ 0.74
MAP1LC3B-201ENST00000268607 SPATA31A3Q5VYP0 1347 aa19.68■□□□□ 0.74
MAP1LC3B-201ENST00000268607 R3HCC1Q9Y3T6 440 aaKnown RBP19.68■□□□□ 0.74
MAP1LC3B-201ENST00000268607 DCCP43146 1447 aa19.67■□□□□ 0.74
MAP1LC3B-201ENST00000268607 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
MAP1LC3B-201ENST00000268607 NFAT5O94916 1531 aa19.67■□□□□ 0.74
MAP1LC3B-201ENST00000268607 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.67■□□□□ 0.74
MAP1LC3B-201ENST00000268607 CD2BP2O95400 341 aaKnown RBP19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 MSNP26038 577 aaKnown RBP19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 PPP1R9BQ96SB3 815 aa19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 MAP7D2Q96T17 732 aa19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 NLRP2Q9NX02 1062 aa19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
MAP1LC3B-201ENST00000268607 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
MAP1LC3B-201ENST00000268607 KIAA0232Q92628 1395 aa19.65■□□□□ 0.74
MAP1LC3B-201ENST00000268607 CSB-PGBD3P0DP91 1061 aa19.65■□□□□ 0.74
MAP1LC3B-201ENST00000268607 ZBTB7BO15156 539 aaPredicted RBP19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 LNPKQ9C0E8 428 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 SSFA2P28290 1259 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 PXDNQ92626 1479 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 RGPD2P0DJD1 1756 aa19.64■□□□□ 0.73
MAP1LC3B-201ENST00000268607 KIF2CQ99661 725 aa19.63■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ANP32BQ92688 251 aaKnown RBP19.63■□□□□ 0.73
MAP1LC3B-201ENST00000268607 PTMSP20962 102 aa19.62■□□□□ 0.73
MAP1LC3B-201ENST00000268607 TERF1P54274 439 aa19.62■□□□□ 0.73
MAP1LC3B-201ENST00000268607 BRPF1P55201 1214 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-201ENST00000268607 SMAP1Q8IYB5 467 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-201ENST00000268607 TNS3Q68CZ2 1445 aa19.62■□□□□ 0.73
MAP1LC3B-201ENST00000268607 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-201ENST00000268607 DDX49Q9Y6V7 483 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3B-201ENST00000268607 RGPD5Q99666 1765 aa19.61■□□□□ 0.73
MAP1LC3B-201ENST00000268607 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
MAP1LC3B-201ENST00000268607 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
MAP1LC3B-201ENST00000268607 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
MAP1LC3B-201ENST00000268607 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3B-201ENST00000268607 CHL1O00533 1208 aa19.6■□□□□ 0.73
MAP1LC3B-201ENST00000268607 KIF1AQ12756 1690 aa19.6■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ARHGEF10O15013 1369 aa19.6■□□□□ 0.73
MAP1LC3B-201ENST00000268607 UQCRHLA0A096LP55 91 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 UQCRHP07919 91 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ARHGAP45Q92619 1136 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 LGR6Q9HBX8 967 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 K7ELQ4 463 aaPredicted RBP19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 NUCB1Q02818 461 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 GOLGA6L22H0YM25 854 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 RTF1Q92541 710 aaKnown RBP19.59■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ANKRD45Q5TZF3 282 aa19.58■□□□□ 0.73
MAP1LC3B-201ENST00000268607 ERBB3P21860 1342 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 KDRP35968 1356 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 NECTIN2Q92692 538 aa19.58■□□□□ 0.72
MAP1LC3B-201ENST00000268607 RGPD1P0DJD0 1748 aa19.57■□□□□ 0.72
MAP1LC3B-201ENST00000268607 IL17REQ8NFR9 667 aa19.57■□□□□ 0.72
MAP1LC3B-201ENST00000268607 ABCC4O15439 1325 aa19.57■□□□□ 0.72
MAP1LC3B-201ENST00000268607 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
MAP1LC3B-201ENST00000268607 BAG4O95429 457 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3B-201ENST00000268607 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
MAP1LC3B-201ENST00000268607 API5Q9BZZ5 524 aaKnown RBP19.55■□□□□ 0.72
MAP1LC3B-201ENST00000268607 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
MAP1LC3B-201ENST00000268607 SLIT3O75094 1523 aa19.55■□□□□ 0.72
MAP1LC3B-201ENST00000268607 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 ZNF530Q6P9A1 599 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-201ENST00000268607 BMP2KLQ5H9B9 411 aa19.53■□□□□ 0.72
MAP1LC3B-201ENST00000268607 RTL1A6NKG5 1358 aa19.53■□□□□ 0.72
MAP1LC3B-201ENST00000268607 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3B-201ENST00000268607 CAVIN1Q6NZI2 390 aaKnown RBP19.52■□□□□ 0.72
MAP1LC3B-201ENST00000268607 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
MAP1LC3B-201ENST00000268607 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.72
MAP1LC3B-201ENST00000268607 CRB1P82279 1406 aa19.52■□□□□ 0.71
MAP1LC3B-201ENST00000268607 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
MAP1LC3B-201ENST00000268607 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
MAP1LC3B-201ENST00000268607 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
MAP1LC3B-201ENST00000268607 G2E3Q7L622 706 aa19.51■□□□□ 0.71
MAP1LC3B-201ENST00000268607 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
MAP1LC3B-201ENST00000268607 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 KCNQ3O43525 872 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms